RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Chd9Q8BYH8 2885 aa5.96□□□□□ -1.46
Lig4-201ENSMUST00000095476 Lama5Q61001 3718 aa5.96□□□□□ -1.46
Lig4-201ENSMUST00000095476 Krtap14O08640 167 aa5.95□□□□□ -1.46
Lig4-201ENSMUST00000095476 Cox6b2Q80ZN9 88 aa5.95□□□□□ -1.46
Lig4-201ENSMUST00000095476 Ndufaf8A2AMZ4 74 aa5.95□□□□□ -1.46
Lig4-201ENSMUST00000095476 Nf1Q04690 2841 aa5.94□□□□□ -1.46
Lig4-201ENSMUST00000095476 Krtap29-1A2A5X4 342 aa5.93□□□□□ -1.46
Lig4-201ENSMUST00000095476 Fam229aB2KGE5 128 aa5.91□□□□□ -1.46
Lig4-201ENSMUST00000095476 Tenm3Q9WTS6 2715 aa5.89□□□□□ -1.47
Lig4-201ENSMUST00000095476 2310050C09RikG5E8Z3 280 aa5.88□□□□□ -1.47
Lig4-201ENSMUST00000095476 Smg1Q8BKX6 3658 aaKnown RBP5.88□□□□□ -1.47
Lig4-201ENSMUST00000095476 Spink7Q6IE32 76 aa5.86□□□□□ -1.47
Lig4-201ENSMUST00000095476 D6Ertd527eA0A0N4SWI3 464 aa5.84□□□□□ -1.47
Lig4-201ENSMUST00000095476 Stab2Q8R4U0 2559 aa5.83□□□□□ -1.48
Lig4-201ENSMUST00000095476 Gm19426M0QWC7 77 aa5.83□□□□□ -1.48
Lig4-201ENSMUST00000095476 Krtap15-1Q9QZU5 150 aa5.8□□□□□ -1.48
Lig4-201ENSMUST00000095476 Camk2n1Q6QWF9 78 aa5.8□□□□□ -1.48
Lig4-201ENSMUST00000095476 Krtap13O88375 197 aa5.79□□□□□ -1.48
Lig4-201ENSMUST00000095476 Srrm2Q8BTI8 2703 aaKnown RBP5.78□□□□□ -1.48
Lig4-201ENSMUST00000095476 Gm17349F7BGH6 99 aa5.78□□□□□ -1.48
Lig4-201ENSMUST00000095476 Gm5767A0A0J9YTU8 78 aa5.76□□□□□ -1.49
Lig4-201ENSMUST00000095476 Gm9112A2AI92 75 aa5.76□□□□□ -1.49
Lig4-201ENSMUST00000095476 BC029722A0A0N4SW31 51 aa5.74□□□□□ -1.49
Lig4-201ENSMUST00000095476 OtogO55225 2910 aa5.74□□□□□ -1.49
Lig4-201ENSMUST00000095476 Pdzd2E9Q1M1 2796 aa5.73□□□□□ -1.49
Lig4-201ENSMUST00000095476 2310061N02RikQ9D6S9 174 aa5.73□□□□□ -1.49
Lig4-201ENSMUST00000095476 TgO08710 2766 aa5.72□□□□□ -1.49
Lig4-201ENSMUST00000095476 Tnp2P11378 117 aa5.7□□□□□ -1.5
Lig4-201ENSMUST00000095476 Gm884A2A9H6 3643 aa5.7□□□□□ -1.5
Lig4-201ENSMUST00000095476 Gm20537G3UYK7 97 aa5.7□□□□□ -1.5
Lig4-201ENSMUST00000095476 Rps29P62274 56 aa5.67□□□□□ -1.5
Lig4-201ENSMUST00000095476 Col7a1Q63870 2944 aa5.66□□□□□ -1.5
Lig4-201ENSMUST00000095476 Megf8P60882 2789 aa5.66□□□□□ -1.5
Lig4-201ENSMUST00000095476 ApcQ61315 2845 aa5.65□□□□□ -1.5
Lig4-201ENSMUST00000095476 Csmd1Q923L3 3564 aa5.64□□□□□ -1.51
Lig4-201ENSMUST00000095476 Fbn1Q61554 2873 aaKnown RBP5.64□□□□□ -1.51
Lig4-201ENSMUST00000095476 Prm2P07978 107 aa5.63□□□□□ -1.51
Lig4-201ENSMUST00000095476 SpenQ62504 3644 aaKnown RBP5.62□□□□□ -1.51
Lig4-201ENSMUST00000095476 Gm40193A0A1B0GT39 78 aa5.62□□□□□ -1.51
Lig4-201ENSMUST00000095476 Tenm1Q9WTS4 2731 aa5.59□□□□□ -1.51
Lig4-201ENSMUST00000095476 Svep1A2AVA0 3567 aa5.59□□□□□ -1.51
Lig4-201ENSMUST00000095476 Zfhx3Q61329 3726 aa5.57□□□□□ -1.52
Lig4-201ENSMUST00000095476 Gm9507D3Z5T3 223 aa5.56□□□□□ -1.52
Lig4-201ENSMUST00000095476 Cmya5Q70KF4 3739 aa5.56□□□□□ -1.52
Lig4-201ENSMUST00000095476 2310079G19RikQ9D6L6 185 aa5.56□□□□□ -1.52
Lig4-201ENSMUST00000095476 Sec61bQ9CQS8 96 aaKnown RBP5.53□□□□□ -1.52
Lig4-201ENSMUST00000095476 A930033H14RikG5E8X6 103 aa5.53□□□□□ -1.52
Lig4-201ENSMUST00000095476 Gm5965D3Z724 196 aa5.49□□□□□ -1.53
Lig4-201ENSMUST00000095476 Muc4Q8JZM8 3443 aa5.45□□□□□ -1.54
Lig4-201ENSMUST00000095476 Gm21887J3QQ04 176 aa5.44□□□□□ -1.54
Lig4-201ENSMUST00000095476 Krtap10-4Q08EG8 221 aa5.43□□□□□ -1.54
Lig4-201ENSMUST00000095476 Krtap10-10A0A1W2P7T6 217 aa5.43□□□□□ -1.54
Lig4-201ENSMUST00000095476 Muc6Q80T03 2850 aa5.4□□□□□ -1.54
Lig4-201ENSMUST00000095476 VwfQ8CIZ8 2813 aa5.39□□□□□ -1.55
Lig4-201ENSMUST00000095476 Csmd2V9GX34 3611 aa5.38□□□□□ -1.55
Lig4-201ENSMUST00000095476 Tenm2Q9WTS5 2764 aa5.38□□□□□ -1.55
Lig4-201ENSMUST00000095476 B930094E09RikQ8C4T2 136 aa5.38□□□□□ -1.55
Lig4-201ENSMUST00000095476 2310057N15RikQ9D6T8 200 aa5.36□□□□□ -1.55
Lig4-201ENSMUST00000095476 Ank2Q8C8R3 3898 aa5.36□□□□□ -1.55
Lig4-201ENSMUST00000095476 Tnp1P10856 55 aa5.34□□□□□ -1.55
Lig4-201ENSMUST00000095476 A0A1Y7VLE6 161 aa5.28□□□□□ -1.56
Lig4-201ENSMUST00000095476 Gm2696A0A1W2P709 240 aa5.27□□□□□ -1.57
Lig4-201ENSMUST00000095476 LystP97412 3788 aa5.16□□□□□ -1.58
Lig4-201ENSMUST00000095476 Gm17416Q30KP4 66 aa5.16□□□□□ -1.58
Lig4-201ENSMUST00000095476 Gm17402F6Z0L5 76 aa5.13□□□□□ -1.59
Lig4-201ENSMUST00000095476 TnxbO35452 4006 aa5.1□□□□□ -1.59
Lig4-201ENSMUST00000095476 2210017I01RikA0A0A6YVV1 95 aa5.08□□□□□ -1.6
Lig4-201ENSMUST00000095476 Krtap3-2Q9D638 99 aa5.05□□□□□ -1.6
Lig4-201ENSMUST00000095476 Krtap3-3Q9D7P0 99 aa5.05□□□□□ -1.6
Lig4-201ENSMUST00000095476 BsnO88737 3942 aa5.04□□□□□ -1.6
Lig4-201ENSMUST00000095476 CubnQ9JLB4 3623 aa5.01□□□□□ -1.61
Lig4-201ENSMUST00000095476 Gm11939A2A592 99 aa5□□□□□ -1.61
Lig4-201ENSMUST00000095476 Gm9918Q8BUR5 174 aa4.97□□□□□ -1.61
Lig4-201ENSMUST00000095476 Xirp2Q4U4S6 3784 aa4.94□□□□□ -1.62
Lig4-201ENSMUST00000095476 Dnah14A0A140LIJ4 4489 aa4.92□□□□□ -1.62
Lig4-201ENSMUST00000095476 A0A1Y7VJH8 109 aa4.87□□□□□ -1.63
Lig4-201ENSMUST00000095476 Krtap3-1A2A591 98 aa4.87□□□□□ -1.63
Lig4-201ENSMUST00000095476 A030003K21RikA0A1Y7VIM3 128 aa4.85□□□□□ -1.63
Lig4-201ENSMUST00000095476 Hspg2Q05793 3707 aaKnown RBP4.83□□□□□ -1.64
Lig4-201ENSMUST00000095476 Ryr1E9PZQ0 5035 aa4.83□□□□□ -1.64
Lig4-201ENSMUST00000095476 Gm9736A0A1W2P7N1 277 aa4.83□□□□□ -1.64
Lig4-201ENSMUST00000095476 Krtap28-10A0A1Y7VP58 119 aa4.82□□□□□ -1.64
Lig4-201ENSMUST00000095476 Dnah10D3YYQ8 4591 aa4.81□□□□□ -1.64
Lig4-201ENSMUST00000095476 Krtap13-1Q8K198 168 aa4.79□□□□□ -1.64
Lig4-201ENSMUST00000095476 Krtap7-1Q9D3I6 87 aa4.78□□□□□ -1.64
Lig4-201ENSMUST00000095476 Gm19668J3QMD1 248 aa4.77□□□□□ -1.65
Lig4-201ENSMUST00000095476 Huwe1Q7TMY8 4377 aaKnown RBP4.77□□□□□ -1.65
Lig4-201ENSMUST00000095476 Krtap28-13A0A087WQP5 138 aa4.74□□□□□ -1.65
Lig4-201ENSMUST00000095476 4933428G20RikQ9D3X4 101 aa4.72□□□□□ -1.65
Lig4-201ENSMUST00000095476 PlecQ9QXS1 4691 aaKnown RBP4.68□□□□□ -1.66
Lig4-201ENSMUST00000095476 A030005K14RikA0A1Y7VNY1 122 aa4.67□□□□□ -1.66
Lig4-201ENSMUST00000095476 Ryr3A2AGL3 4863 aa4.65□□□□□ -1.66
Lig4-201ENSMUST00000095476 Krtap19-5O08632 62 aa4.65□□□□□ -1.67
Lig4-201ENSMUST00000095476 A0A1Y7VJ07 166 aa4.64□□□□□ -1.67
Lig4-201ENSMUST00000095476 Gm18596A0A1W2P860 280 aa4.63□□□□□ -1.67
Lig4-201ENSMUST00000095476 PrkdcP97313 4128 aa4.61□□□□□ -1.67
Lig4-201ENSMUST00000095476 Dnah6E9Q0B6 4144 aa4.58□□□□□ -1.68
Lig4-201ENSMUST00000095476 Gm6217A0A1Y7VJK9 128 aa4.56□□□□□ -1.68
Lig4-201ENSMUST00000095476 Sprr2a3Q4KL71 83 aa4.53□□□□□ -1.68
Lig4-201ENSMUST00000095476 Sprr2a1Q9CQK8 83 aa4.53□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 87.4 ms