RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Dmxl2Q8BPN8 3032 aa6.29□□□□□ -1.4
Rtn3-202ENSMUST00000065304 Stab2Q8R4U0 2559 aa6.29□□□□□ -1.4
Rtn3-202ENSMUST00000065304 Itpr1P11881 2749 aa6.28□□□□□ -1.4
Rtn3-202ENSMUST00000065304 Gm7137J3QMW1 236 aa6.27□□□□□ -1.41
Rtn3-202ENSMUST00000065304 LrbaQ9ESE1 2856 aa6.27□□□□□ -1.41
Rtn3-202ENSMUST00000065304 NipblQ6KCD5 2798 aaKnown RBP6.26□□□□□ -1.41
Rtn3-202ENSMUST00000065304 Zfp292Q9Z2U2 2698 aa6.26□□□□□ -1.41
Rtn3-202ENSMUST00000065304 DspE9Q557 2883 aaKnown RBP6.23□□□□□ -1.41
Rtn3-202ENSMUST00000065304 Myo15bI7HPW8 3033 aa6.23□□□□□ -1.41
Rtn3-202ENSMUST00000065304 Svep1A2AVA0 3567 aa6.23□□□□□ -1.41
Rtn3-202ENSMUST00000065304 Itpr3P70227 2670 aa6.2□□□□□ -1.42
Rtn3-202ENSMUST00000065304 Prrc2cQ3TLH4 2846 aaKnown RBP6.18□□□□□ -1.42
Rtn3-202ENSMUST00000065304 Gm5965D3Z724 196 aa6.18□□□□□ -1.42
Rtn3-202ENSMUST00000065304 FcgbpE9Q0B5 2583 aa6.17□□□□□ -1.42
Rtn3-202ENSMUST00000065304 Trank1Q8BV79 2999 aa6.16□□□□□ -1.42
Rtn3-202ENSMUST00000065304 Tnp2P11378 117 aa6.15□□□□□ -1.42
Rtn3-202ENSMUST00000065304 Col6a5A6H584 2640 aa6.14□□□□□ -1.43
Rtn3-202ENSMUST00000065304 Pkd1l1Q8R526 2615 aa6.11□□□□□ -1.43
Rtn3-202ENSMUST00000065304 Chd9Q8BYH8 2885 aa6.11□□□□□ -1.43
Rtn3-202ENSMUST00000065304 Gm9195A0A140LHT4 2805 aa6.09□□□□□ -1.44
Rtn3-202ENSMUST00000065304 Adgrg4B7ZCC9 3073 aa6.08□□□□□ -1.44
Rtn3-202ENSMUST00000065304 2310057N15RikQ9D6T8 200 aa6.07□□□□□ -1.44
Rtn3-202ENSMUST00000065304 B930094E09RikQ8C4T2 136 aa6.04□□□□□ -1.44
Rtn3-202ENSMUST00000065304 Ubr5Q80TP3 2792 aa6.02□□□□□ -1.44
Rtn3-202ENSMUST00000065304 Krtap10-10A0A1W2P7T6 217 aa6.02□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Gm20537G3UYK7 97 aa6.02□□□□□ -1.45
Rtn3-202ENSMUST00000065304 2310061N02RikQ9D6S9 174 aa5.99□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Helz2E9QAM5 2947 aaKnown RBP5.99□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Utp20Q5XG71 2788 aaKnown RBP5.98□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Prm2P07978 107 aa5.98□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Gm36176A0A1W2P8D5 158 aa5.97□□□□□ -1.45
Rtn3-202ENSMUST00000065304 Xirp2Q4U4S6 3784 aa5.95□□□□□ -1.46
Rtn3-202ENSMUST00000065304 4933428G20RikQ9D3X4 101 aa5.95□□□□□ -1.46
Rtn3-202ENSMUST00000065304 CubnQ9JLB4 3623 aa5.91□□□□□ -1.46
Rtn3-202ENSMUST00000065304 Hspg2Q05793 3707 aaKnown RBP5.89□□□□□ -1.47
Rtn3-202ENSMUST00000065304 Nbeal2Q6ZQA0 2742 aa5.87□□□□□ -1.47
Rtn3-202ENSMUST00000065304 Gm9507D3Z5T3 223 aa5.85□□□□□ -1.47
Rtn3-202ENSMUST00000065304 Gm17402F6Z0L5 76 aa5.85□□□□□ -1.47
Rtn3-202ENSMUST00000065304 Tex15F8VPN2 2785 aa5.81□□□□□ -1.48
Rtn3-202ENSMUST00000065304 Krtap10-4Q08EG8 221 aa5.8□□□□□ -1.48
Rtn3-202ENSMUST00000065304 Csmd3Q80T79 3707 aa5.8□□□□□ -1.48
Rtn3-202ENSMUST00000065304 A930033H14RikG5E8X6 103 aa5.79□□□□□ -1.48
Rtn3-202ENSMUST00000065304 Itpr2Q9Z329 2701 aa5.78□□□□□ -1.48
Rtn3-202ENSMUST00000065304 Ank2Q8C8R3 3898 aa5.77□□□□□ -1.49
Rtn3-202ENSMUST00000065304 TgO08710 2766 aa5.77□□□□□ -1.49
Rtn3-202ENSMUST00000065304 Muc2Q80Z19 2680 aa5.77□□□□□ -1.49
Rtn3-202ENSMUST00000065304 Gm17416Q30KP4 66 aa5.76□□□□□ -1.49
Rtn3-202ENSMUST00000065304 Ash1lQ99MY8 2958 aa5.75□□□□□ -1.49
Rtn3-202ENSMUST00000065304 Megf8P60882 2789 aa5.75□□□□□ -1.49
Rtn3-202ENSMUST00000065304 Celsr2Q9R0M0 2920 aa5.74□□□□□ -1.49
Rtn3-202ENSMUST00000065304 BsnO88737 3942 aa5.7□□□□□ -1.5
Rtn3-202ENSMUST00000065304 Srrm2Q8BTI8 2703 aaKnown RBP5.7□□□□□ -1.5
Rtn3-202ENSMUST00000065304 Fbn2Q61555 2907 aa5.69□□□□□ -1.5
Rtn3-202ENSMUST00000065304 2310079G19RikQ9D6L6 185 aa5.67□□□□□ -1.5
Rtn3-202ENSMUST00000065304 OtogO55225 2910 aa5.64□□□□□ -1.51
Rtn3-202ENSMUST00000065304 2210017I01RikA0A0A6YVV1 95 aa5.64□□□□□ -1.51
Rtn3-202ENSMUST00000065304 Hivep1Q03172 2688 aa5.62□□□□□ -1.51
Rtn3-202ENSMUST00000065304 Gm2696A0A1W2P709 240 aa5.57□□□□□ -1.52
Rtn3-202ENSMUST00000065304 Igfn1Q3KNY0 2849 aa5.55□□□□□ -1.52
Rtn3-202ENSMUST00000065304 Tenm2Q9WTS5 2764 aa5.54□□□□□ -1.52
Rtn3-202ENSMUST00000065304 Kmt2aP55200 3966 aa5.53□□□□□ -1.52
Rtn3-202ENSMUST00000065304 Dnah1E9Q8T7 4250 aa5.52□□□□□ -1.53
Rtn3-202ENSMUST00000065304 Gm9918Q8BUR5 174 aa5.51□□□□□ -1.53
Rtn3-202ENSMUST00000065304 Gm19668J3QMD1 248 aa5.5□□□□□ -1.53
Rtn3-202ENSMUST00000065304 Dnah3Q8BW94 4083 aa5.5□□□□□ -1.53
Rtn3-202ENSMUST00000065304 ApcQ61315 2845 aa5.48□□□□□ -1.53
Rtn3-202ENSMUST00000065304 FlncQ8VHX6 2726 aaKnown RBP5.48□□□□□ -1.53
Rtn3-202ENSMUST00000065304 Nf1Q04690 2841 aa5.45□□□□□ -1.54
Rtn3-202ENSMUST00000065304 Tenm4Q3UHK6 2771 aa5.44□□□□□ -1.54
Rtn3-202ENSMUST00000065304 Dnah11E9Q7N9 4488 aa5.42□□□□□ -1.54
Rtn3-202ENSMUST00000065304 Tenm1Q9WTS4 2731 aa5.36□□□□□ -1.55
Rtn3-202ENSMUST00000065304 Fbn1Q61554 2873 aaKnown RBP5.35□□□□□ -1.55
Rtn3-202ENSMUST00000065304 Dnah7bL7N1Y0 4068 aa5.33□□□□□ -1.56
Rtn3-202ENSMUST00000065304 Pdzd2E9Q1M1 2796 aa5.32□□□□□ -1.56
Rtn3-202ENSMUST00000065304 Dnah9B1AR51 4484 aa5.21□□□□□ -1.57
Rtn3-202ENSMUST00000065304 Dnah7aE9Q0T8 4024 aa5.19□□□□□ -1.58
Rtn3-202ENSMUST00000065304 Krtap13-1Q8K198 168 aa5.19□□□□□ -1.58
Rtn3-202ENSMUST00000065304 Dnah17Q69Z23 4481 aa5.15□□□□□ -1.59
Rtn3-202ENSMUST00000065304 Hectd4E9Q2E4 4418 aa5.13□□□□□ -1.59
Rtn3-202ENSMUST00000065304 Tenm3Q9WTS6 2715 aa5.12□□□□□ -1.59
Rtn3-202ENSMUST00000065304 Dync2h1Q45VK7 4306 aa5.11□□□□□ -1.59
Rtn3-202ENSMUST00000065304 Gm9736A0A1W2P7N1 277 aa5.08□□□□□ -1.6
Rtn3-202ENSMUST00000065304 Fras1Q80T14 4010 aa5.07□□□□□ -1.6
Rtn3-202ENSMUST00000065304 Dnah7cA0A087WR13 4024 aa5.05□□□□□ -1.6
Rtn3-202ENSMUST00000065304 Gm11939A2A592 99 aa5.04□□□□□ -1.6
Rtn3-202ENSMUST00000065304 Gm6358A0A087WPH4 74 aa5.03□□□□□ -1.6
Rtn3-202ENSMUST00000065304 Col7a1Q63870 2944 aa5.02□□□□□ -1.61
Rtn3-202ENSMUST00000065304 Dnah6E9Q0B6 4144 aa5.01□□□□□ -1.61
Rtn3-202ENSMUST00000065304 Krtap3-1A2A591 98 aa5□□□□□ -1.61
Rtn3-202ENSMUST00000065304 Dnah2P0C6F1 4456 aa5□□□□□ -1.61
Rtn3-202ENSMUST00000065304 Vps13dB1ART2 4390 aa4.99□□□□□ -1.61
Rtn3-202ENSMUST00000065304 Dnah10D3YYQ8 4591 aa4.96□□□□□ -1.62
Rtn3-202ENSMUST00000065304 Dnah14A0A140LIJ4 4489 aa4.92□□□□□ -1.62
Rtn3-202ENSMUST00000065304 ApobE9Q414 4505 aa4.91□□□□□ -1.62
Rtn3-202ENSMUST00000065304 VwfQ8CIZ8 2813 aa4.91□□□□□ -1.62
Rtn3-202ENSMUST00000065304 Vps13bQ80TY5 3993 aa4.9□□□□□ -1.63
Rtn3-202ENSMUST00000065304 Gm18596A0A1W2P860 280 aa4.9□□□□□ -1.63
Rtn3-202ENSMUST00000065304 Krtap3-2Q9D638 99 aa4.89□□□□□ -1.63
Rtn3-202ENSMUST00000065304 Krtap3-3Q9D7P0 99 aa4.89□□□□□ -1.63
Rtn3-202ENSMUST00000065304 Krtap7-1Q9D3I6 87 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms