RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dchs1E9PVD3 3291 aa4.94□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 Zfhx4Q9JJN2 3550 aa4.94□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 KalrnA2CG49 2964 aa4.93□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 TgO08710 2766 aa4.93□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 Hivep1Q03172 2688 aa4.92□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 Bod1lE9Q6J5 3032 aa4.91□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 Lama1P19137 3084 aa4.91□□□□□ -1.62
Ccdc47-201ENSMUST00000002043 Celsr1O35161 3034 aa4.88□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Ranbp2Q9ERU9 3053 aaKnown RBP4.88□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 A930033H14RikG5E8X6 103 aa4.87□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Muc2Q80Z19 2680 aa4.87□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Wdfy4E9Q2M9 3149 aa4.87□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Itpr2Q9Z329 2701 aa4.87□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Gm9507D3Z5T3 223 aa4.86□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Gm17416Q30KP4 66 aa4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Srrm2Q8BTI8 2703 aaKnown RBP4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Cmya5Q70KF4 3739 aa4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 FryE9Q8I9 3020 aa4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 A0A1Y7VJH8 109 aa4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Gm17402F6Z0L5 76 aa4.85□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 B930094E09RikQ8C4T2 136 aa4.84□□□□□ -1.63
Ccdc47-201ENSMUST00000002043 Gm20537G3UYK7 97 aa4.83□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 LystP97412 3788 aa4.81□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 Utp20Q5XG71 2788 aaKnown RBP4.8□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 A030003K21RikA0A1Y7VIM3 128 aa4.78□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 Ash1lQ99MY8 2958 aa4.78□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 RelnQ60841 3461 aa4.78□□□□□ -1.64
Ccdc47-201ENSMUST00000002043 Krtap28-10A0A1Y7VP58 119 aa4.77□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Gm5965D3Z724 196 aa4.76□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Krtap10-4Q08EG8 221 aa4.76□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Fbn2Q61555 2907 aa4.76□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Smg1Q8BKX6 3658 aaKnown RBP4.76□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Csmd1Q923L3 3564 aa4.75□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Lama5Q61001 3718 aa4.74□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 2310079G19RikQ9D6L6 185 aa4.73□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 ApcQ61315 2845 aa4.72□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Krtap10-10A0A1W2P7T6 217 aa4.72□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 Igfn1Q3KNY0 2849 aa4.72□□□□□ -1.65
Ccdc47-201ENSMUST00000002043 2210017I01RikA0A0A6YVV1 95 aa4.71□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 Celsr3Q91ZI0 3301 aa4.68□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 Dmxl2Q8BPN8 3032 aa4.67□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 Pdzd2E9Q1M1 2796 aa4.66□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 Krtap4-1Q3UUY3 169 aa4.66□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 FlncQ8VHX6 2726 aaKnown RBP4.65□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 Megf8P60882 2789 aa4.65□□□□□ -1.66
Ccdc47-201ENSMUST00000002043 NbeaQ9EPN1 2936 aa4.64□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 2310057N15RikQ9D6T8 200 aa4.62□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 4933428G20RikQ9D3X4 101 aa4.61□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 Gm2696A0A1W2P709 240 aa4.61□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 Tenm4Q3UHK6 2771 aa4.6□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 Prm2P07978 107 aa4.6□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 Muc4Q8JZM8 3443 aa4.6□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 Zzef1Q5SSH7 2924 aa4.59□□□□□ -1.67
Ccdc47-201ENSMUST00000002043 DspE9Q557 2883 aaKnown RBP4.57□□□□□ -1.68
Ccdc47-201ENSMUST00000002043 Ank2Q8C8R3 3898 aa4.53□□□□□ -1.68
Ccdc47-201ENSMUST00000002043 Tenm1Q9WTS4 2731 aa4.53□□□□□ -1.68
Ccdc47-201ENSMUST00000002043 Svep1A2AVA0 3567 aa4.53□□□□□ -1.68
Ccdc47-201ENSMUST00000002043 Krtap28-13A0A087WQP5 138 aa4.52□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 Gm7544A0A1Y7VJ58 118 aa4.49□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 CubnQ9JLB4 3623 aa4.49□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 Trank1Q8BV79 2999 aa4.49□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 Hspg2Q05793 3707 aaKnown RBP4.47□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 Gm6217A0A1Y7VJK9 128 aa4.47□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 A030005L19RikA0A1Y7VIU2 113 aa4.46□□□□□ -1.69
Ccdc47-201ENSMUST00000002043 Nf1Q04690 2841 aa4.46□□□□□ -1.7
Ccdc47-201ENSMUST00000002043 Adgrg4B7ZCC9 3073 aa4.44□□□□□ -1.7
Ccdc47-201ENSMUST00000002043 Gm19668J3QMD1 248 aa4.44□□□□□ -1.7
Ccdc47-201ENSMUST00000002043 BsnO88737 3942 aa4.44□□□□□ -1.7
Ccdc47-201ENSMUST00000002043 Xirp2Q4U4S6 3784 aa4.41□□□□□ -1.7
Ccdc47-201ENSMUST00000002043 Celsr2Q9R0M0 2920 aa4.4□□□□□ -1.71
Ccdc47-201ENSMUST00000002043 A030005K14RikA0A1Y7VNY1 122 aa4.4□□□□□ -1.71
Ccdc47-201ENSMUST00000002043 Chd9Q8BYH8 2885 aa4.39□□□□□ -1.71
Ccdc47-201ENSMUST00000002043 Tenm3Q9WTS6 2715 aa4.37□□□□□ -1.71
Ccdc47-201ENSMUST00000002043 LrbaQ9ESE1 2856 aa4.34□□□□□ -1.71
Ccdc47-201ENSMUST00000002043 Gm11939A2A592 99 aa4.33□□□□□ -1.72
Ccdc47-201ENSMUST00000002043 Helz2E9QAM5 2947 aaKnown RBP4.32□□□□□ -1.72
Ccdc47-201ENSMUST00000002043 Kmt2aP55200 3966 aa4.32□□□□□ -1.72
Ccdc47-201ENSMUST00000002043 Csmd3Q80T79 3707 aa4.3□□□□□ -1.72
Ccdc47-201ENSMUST00000002043 Tenm2Q9WTS5 2764 aa4.3□□□□□ -1.72
Ccdc47-201ENSMUST00000002043 A0A1Y7VJ07 166 aa4.27□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Gm11563B1AQ90 168 aa4.27□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Krtap4-7Q9D732 168 aa4.27□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Krtap13-1Q8K198 168 aa4.25□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Gm11555B1AQ89 175 aa4.25□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Col7a1Q63870 2944 aa4.23□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Dnah3Q8BW94 4083 aa4.23□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Dnah1E9Q8T7 4250 aa4.22□□□□□ -1.73
Ccdc47-201ENSMUST00000002043 Krtap3-1A2A591 98 aa4.21□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 Krtap3-2Q9D638 99 aa4.21□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 Krtap3-3Q9D7P0 99 aa4.21□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 Gm9736A0A1W2P7N1 277 aa4.2□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 OtogO55225 2910 aa4.18□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 Gm9918Q8BUR5 174 aa4.18□□□□□ -1.74
Ccdc47-201ENSMUST00000002043 Krtap19-5O08632 62 aa4.14□□□□□ -1.75
Ccdc47-201ENSMUST00000002043 Dync2h1Q45VK7 4306 aa4.09□□□□□ -1.76
Ccdc47-201ENSMUST00000002043 Dnah6E9Q0B6 4144 aa4.04□□□□□ -1.76
Ccdc47-201ENSMUST00000002043 VwfQ8CIZ8 2813 aa4.03□□□□□ -1.76
Ccdc47-201ENSMUST00000002043 Fbn1Q61554 2873 aaKnown RBP4.02□□□□□ -1.77
Ccdc47-201ENSMUST00000002043 Sprr2a3Q4KL71 83 aa4□□□□□ -1.77
Ccdc47-201ENSMUST00000002043 Sprr2a1Q9CQK8 83 aa4□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms