RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Nupr2Q497P3 102 aa5.48□□□□□ -1.53
Bdnf-210ENSMUST00000111051 Gm26620Q9CY65 116 aa5.48□□□□□ -1.53
Bdnf-210ENSMUST00000111051 Notch1Q01705 2531 aa5.48□□□□□ -1.53
Bdnf-210ENSMUST00000111051 Fam168bQ80XQ8 194 aa5.47□□□□□ -1.53
Bdnf-210ENSMUST00000111051 A730071L15RikQ8C4X0 137 aa5.47□□□□□ -1.53
Bdnf-210ENSMUST00000111051 P84750 121 aa5.47□□□□□ -1.53
Bdnf-210ENSMUST00000111051 CicQ924A2 2510 aa5.46□□□□□ -1.53
Bdnf-210ENSMUST00000111051 Coa5Q99M07 74 aa5.46□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Igfn1Q3KNY0 2849 aa5.46□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Defb13Q8R2I4 64 aa5.46□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Znf706Q9D115 76 aaKnown RBP5.46□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Phxr4P15974 95 aa5.45□□□□□ -1.54
Bdnf-210ENSMUST00000111051 AtrQ9JKK8 2635 aa5.45□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Kmt2bO08550 2713 aa5.44□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Tep1P97499 2629 aa5.44□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Smim29Q8R043 75 aa5.44□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Igkv3-7A0A0G2JE31 119 aa5.43□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Gm3233E9Q2H5 230 aa5.43□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Defb38Q7TNV7 63 aa5.42□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Igkv3-3A0A140T8Q0 119 aa5.42□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Fam104aA2A6P4 185 aa5.41□□□□□ -1.54
Bdnf-210ENSMUST00000111051 U90926O08546 118 aa5.41□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Csmd1Q923L3 3564 aa5.41□□□□□ -1.54
Bdnf-210ENSMUST00000111051 Rpl37aP61514 92 aa5.4□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Gm4707V9GXN5 68 aa5.4□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Phf5aP83870 110 aaKnown RBP5.39□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Phxr5P08399 672 aa5.38□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Smg1Q8BKX6 3658 aaKnown RBP5.38□□□□□ -1.55
Bdnf-210ENSMUST00000111051 OxtP35454 125 aa5.38□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Ndufs5Q99LY9 106 aa5.37□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Nsd1O88491 2588 aaKnown RBP5.37□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Stab1Q8R4Y4 2571 aa5.36□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Chd9Q8BYH8 2885 aa5.36□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Nf1Q04690 2841 aa5.36□□□□□ -1.55
Bdnf-210ENSMUST00000111051 A030005L19RikA0A1Y7VIU2 113 aa5.36□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Gm3646F6S692 53 aa5.36□□□□□ -1.55
Bdnf-210ENSMUST00000111051 HrnrQ8VHD8 2496 aa5.35□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Gm27235Q3UW50 83 aa5.35□□□□□ -1.55
Bdnf-210ENSMUST00000111051 FlnbQ80X90 2602 aaKnown RBP5.35□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Adm2Q7TNK8 150 aa5.34□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Defb10Q8R2I8 73 aa5.34□□□□□ -1.55
Bdnf-210ENSMUST00000111051 AW011738F6S7Q2 159 aa5.34□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Gm10642Q3TWM1 71 aa5.34□□□□□ -1.55
Bdnf-210ENSMUST00000111051 Sprr1aQ62266 144 aa5.33□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Cmya5Q70KF4 3739 aa5.33□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Zcchc13Q9D548 170 aa5.33□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Mast4Q811L6 2618 aa5.33□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Fn1P11276 2477 aaKnown RBP5.32□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Celsr2Q9R0M0 2920 aa5.32□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Chtf8P0CG14 533 aa5.32□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Limd2Q8BGB5 128 aa5.31□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Akap13E9Q394 2776 aa5.31□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Gm20661K7N787 53 aa5.31□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Gm37013Q8K491 104 aa5.3□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Svep1A2AVA0 3567 aa5.29□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Spata3Q9D9T6 193 aa5.28□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Gm7138L7N2C3 230 aa5.28□□□□□ -1.56
Bdnf-210ENSMUST00000111051 1600014C23RikQ9DAX4 101 aa5.28□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Gm3238W4VSP7 230 aa5.28□□□□□ -1.56
Bdnf-210ENSMUST00000111051 Gm9821Q8K076 103 aa5.27□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Tenm3Q9WTS6 2715 aa5.27□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Defb9Q8R2I6 67 aa5.27□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Gm10139O88245 57 aa5.26□□□□□ -1.57
Bdnf-210ENSMUST00000111051 LrbaQ9ESE1 2856 aa5.23□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Tex15F8VPN2 2785 aa5.23□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Wfdc3Q14AE4 130 aa5.22□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Gm12216A0A1W2P827 62 aa5.22□□□□□ -1.57
Bdnf-210ENSMUST00000111051 Defb39Q70KL3 74 aa5.22□□□□□ -1.57
Bdnf-210ENSMUST00000111051 FasnP19096 2504 aaKnown RBP5.21□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Uqcr11Q9CPX8 56 aa5.21□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Col6a5A6H584 2640 aa5.2□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Krtap28-13A0A087WQP5 138 aa5.2□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Wfdc17Q5SSJ1 76 aa5.2□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Ly6g6cQ9Z1Q4 126 aa5.2□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Odf3bQ5M8M2 238 aa5.19□□□□□ -1.58
Bdnf-210ENSMUST00000111051 OtogO55225 2910 aa5.19□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Cypt15B1AXS0 87 aa5.18□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Gm10999F6Q4M4 69 aa5.18□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Hivep1Q03172 2688 aa5.18□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Gm10065F6TJM2 114 aa5.18□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Nbeal2Q6ZQA0 2742 aa5.17□□□□□ -1.58
Bdnf-210ENSMUST00000111051 2310034C09RikQ9D746 214 aa5.17□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Itpr2Q9Z329 2701 aa5.17□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Cypt14J3QPF7 87 aa5.17□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Gm7137J3QMW1 236 aa5.16□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Spaca4Q80ZQ0 127 aa5.16□□□□□ -1.58
Bdnf-210ENSMUST00000111051 Plac8Q9JI48 112 aa5.15□□□□□ -1.58
Bdnf-210ENSMUST00000111051 A030005K14RikA0A1Y7VNY1 122 aa5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 6030445D17RikE9Q8F9 148 aa5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Stab2Q8R4U0 2559 aa5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Helz2E9QAM5 2947 aaKnown RBP5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Anapc11Q9CPX9 84 aa5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 LystP97412 3788 aa5.15□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Pdzd2E9Q1M1 2796 aa5.14□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Gpr15lA0A0B4J1N3 78 aa5.14□□□□□ -1.59
Bdnf-210ENSMUST00000111051 ApcQ61315 2845 aa5.14□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Q8BGJ3 129 aa5.13□□□□□ -1.59
Bdnf-210ENSMUST00000111051 NbdyA0A0N4SUI7 68 aa5.12□□□□□ -1.59
Bdnf-210ENSMUST00000111051 TgO08710 2766 aa5.12□□□□□ -1.59
Bdnf-210ENSMUST00000111051 Col7a1Q63870 2944 aa5.12□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms