RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Krtap15-1Q9QZU5 150 aa3.9□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Lelp1Q9DAE3 120 aa3.88□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Gm7138L7N2C3 230 aa3.87□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Gm3238W4VSP7 230 aa3.87□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Piezo2Q8CD54 2822 aa3.86□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Unc80Q8BLN6 3261 aa3.86□□□□□ -1.79
Scn1a-201ENSMUST00000077489 TrrapQ80YV3 2565 aaKnown RBP3.86□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Gm17349F7BGH6 99 aa3.86□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Ep400Q8CHI8 3072 aaKnown RBP3.85□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Gm2310J3QNJ2 377 aa3.85□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Cox6b2Q80ZN9 88 aa3.85□□□□□ -1.79
Scn1a-201ENSMUST00000077489 BC029722A0A0N4SW31 51 aa3.85□□□□□ -1.79
Scn1a-201ENSMUST00000077489 FasnP19096 2504 aaKnown RBP3.85□□□□□ -1.79
Scn1a-201ENSMUST00000077489 SrcapA0A087WQ44 3271 aa3.84□□□□□ -1.79
Scn1a-201ENSMUST00000077489 Zfhx3Q61329 3726 aa3.83□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Gm9112A2AI92 75 aa3.83□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Fn1P11276 2477 aaKnown RBP3.81□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Gm42715A0A087WP63 3095 aaKnown RBP3.81□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Szt2A2A9C3 3431 aa3.81□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Gm10382Q3V0T5 144 aa3.81□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Prrc2cQ3TLH4 2846 aaKnown RBP3.8□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Gm19426M0QWC7 77 aa3.8□□□□□ -1.8
Scn1a-201ENSMUST00000077489 2310050C09RikG5E8Z3 280 aa3.79□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Ndufaf8A2AMZ4 74 aa3.78□□□□□ -1.8
Scn1a-201ENSMUST00000077489 Cep350E9Q309 3095 aa3.77□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Prm2P07978 107 aa3.74□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Tnp2P11378 117 aa3.74□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Lrrc37aB1AWG4 3215 aa3.74□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Gm7137J3QMW1 236 aa3.73□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Gm9508A0A1W2P7W0 230 aa3.73□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Jbts17Q8CE72 3214 aa3.72□□□□□ -1.81
Scn1a-201ENSMUST00000077489 9530053A07RikE9PVG8 2581 aa3.72□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Lama3Q61789 3330 aa3.72□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Usp24B1AY13 2617 aaKnown RBP3.72□□□□□ -1.81
Scn1a-201ENSMUST00000077489 PcntP48725 2898 aa3.72□□□□□ -1.81
Scn1a-201ENSMUST00000077489 Igsf10Q3V1M1 2594 aa3.71□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Gm36176A0A1W2P8D5 158 aa3.7□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Krtap14O08640 167 aa3.7□□□□□ -1.82
Scn1a-201ENSMUST00000077489 2310061N02RikQ9D6S9 174 aa3.7□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Nsd1O88491 2588 aaKnown RBP3.69□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Gm40193A0A1B0GT39 78 aa3.68□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Map1aQ9QYR6 2776 aa3.66□□□□□ -1.82
Scn1a-201ENSMUST00000077489 D6Ertd527eA0A0N4SWI3 464 aa3.66□□□□□ -1.82
Scn1a-201ENSMUST00000077489 Krtap13O88375 197 aa3.65□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Myo15bI7HPW8 3033 aa3.64□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Akap13E9Q394 2776 aa3.64□□□□□ -1.83
Scn1a-201ENSMUST00000077489 AspmQ8CJ27 3122 aa3.64□□□□□ -1.83
Scn1a-201ENSMUST00000077489 DmdP11531 3678 aa3.63□□□□□ -1.83
Scn1a-201ENSMUST00000077489 AtrQ9JKK8 2635 aa3.62□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Gcn1E9PVA8 2671 aaKnown RBP3.62□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Mast4Q811L6 2618 aa3.61□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Cdh23Q99PF4 3354 aa3.6□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Stab1Q8R4Y4 2571 aa3.59□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Srrm2Q8BTI8 2703 aaKnown RBP3.59□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Gm7173A0A0G2JEB6 3132 aa3.59□□□□□ -1.83
Scn1a-201ENSMUST00000077489 Tnp1P10856 55 aa3.58□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Gm9507D3Z5T3 223 aa3.57□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Stab2Q8R4U0 2559 aa3.57□□□□□ -1.84
Scn1a-201ENSMUST00000077489 A0A1Y7VLE6 161 aa3.57□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Vps13aQ5H8C4 3166 aa3.56□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Wdfy3Q6VNB8 3508 aa3.56□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Dmxl1Q6PNC0 3013 aa3.55□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Brca2P97929 3329 aa3.54□□□□□ -1.84
Scn1a-201ENSMUST00000077489 CenpfE9Q3P4 2997 aaKnown RBP3.54□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Tep1P97499 2629 aa3.54□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Zfp292Q9Z2U2 2698 aa3.53□□□□□ -1.84
Scn1a-201ENSMUST00000077489 TrioQ0KL02 3102 aa3.53□□□□□ -1.84
Scn1a-201ENSMUST00000077489 2310057N15RikQ9D6T8 200 aa3.53□□□□□ -1.84
Scn1a-201ENSMUST00000077489 Pkd1l1Q8R526 2615 aa3.52□□□□□ -1.85
Scn1a-201ENSMUST00000077489 VcanQ62059 3357 aa3.52□□□□□ -1.85
Scn1a-201ENSMUST00000077489 Bahcc1Q3UHR0 2643 aa3.51□□□□□ -1.85
Scn1a-201ENSMUST00000077489 Ubr5Q80TP3 2792 aa3.51□□□□□ -1.85
Scn1a-201ENSMUST00000077489 A930033H14RikG5E8X6 103 aa3.5□□□□□ -1.85
Scn1a-201ENSMUST00000077489 Tnrc18Q80WC3 2878 aa3.49□□□□□ -1.85
Scn1a-201ENSMUST00000077489 BptfA2A654 3036 aaKnown RBP3.49□□□□□ -1.85
Scn1a-201ENSMUST00000077489 SpegQ62407 3262 aa3.48□□□□□ -1.85
Scn1a-201ENSMUST00000077489 CicQ924A2 2510 aa3.48□□□□□ -1.85
Scn1a-201ENSMUST00000077489 Itpr1P11881 2749 aa3.48□□□□□ -1.85
Scn1a-201ENSMUST00000077489 Gm9195A0A140LHT4 2805 aa3.48□□□□□ -1.85
Scn1a-201ENSMUST00000077489 DspE9Q557 2883 aaKnown RBP3.46□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Dnah12Q3V0Q1 3086 aa3.46□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Krtap10-4Q08EG8 221 aa3.46□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Csmd2V9GX34 3611 aa3.45□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Hivep1Q03172 2688 aa3.45□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Rev3lQ61493 3122 aa3.44□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Gm20537G3UYK7 97 aa3.44□□□□□ -1.86
Scn1a-201ENSMUST00000077489 B930094E09RikQ8C4T2 136 aa3.44□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Col6a5A6H584 2640 aa3.43□□□□□ -1.86
Scn1a-201ENSMUST00000077489 SpenQ62504 3644 aaKnown RBP3.43□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Gm5965D3Z724 196 aa3.43□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Zfhx4Q9JJN2 3550 aa3.43□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Nbeal2Q6ZQA0 2742 aa3.42□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Krtap10-10A0A1W2P7T6 217 aa3.42□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Itpr3P70227 2670 aa3.42□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Gm17402F6Z0L5 76 aa3.42□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Chd7A2AJK6 2986 aaKnown RBP3.41□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Chd9Q8BYH8 2885 aa3.41□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Gm17416Q30KP4 66 aa3.41□□□□□ -1.86
Scn1a-201ENSMUST00000077489 Mki67E9PVX6 3177 aaKnown RBP3.4□□□□□ -1.86
Scn1a-201ENSMUST00000077489 2310079G19RikQ9D6L6 185 aa3.39□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms