RNA–Protein interactions for RNA: ENSMUST00000047793.5

Hoxd1-201, Transcript of Homeobox protein Hox-D1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd1-201ENSMUST00000047793 Gm37013Q8K491 104 aa13.44□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 A930002H24RikQ8C8Y3 163 aa13.43□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 A330070K13RikQ8CA53 115 aa13.43□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Dnah17Q69Z23 4481 aa13.43□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Gm11011D3Z3L9 86 aa13.42□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Dmac1Q9CQ00 111 aa13.42□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Defa27F2Z403 93 aa13.41□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Gm12353A2AGJ4 60 aa13.4□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Gm11627A6PWP4 55 aa13.4□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Gm10570F6VB42 170 aa13.4□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Mrpl55Q9CZ83 127 aa13.4□□□□□ -0.26
Hoxd1-201ENSMUST00000047793 Igkv1-122A0A140T8M9 119 aa13.39□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 Gm16485Q8C4B7 115 aa13.38□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 Igkv3-2A0A075B5P0 119 aa13.37□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 TgO08710 2766 aa13.34□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 Prol1E9PYQ4 312 aa13.33□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 A530084C06RikQ3UTW2 186 aa13.33□□□□□ -0.27
Hoxd1-201ENSMUST00000047793 Gm37389A0A0A6YW05 95 aa13.33□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Prr15lQ8JZM2 100 aa13.33□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 P84750 121 aa13.32□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Sprr1aQ62266 144 aa13.32□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Csmd3Q80T79 3707 aa13.32□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 C130032M10RikQ8C888 123 aa13.31□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Igkv3-4A0A140T8Q4 119 aa13.31□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Smim29Q8R043 75 aa13.31□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Mrpl34Q99N91 92 aa13.31□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 A0A286YE02 88 aa13.3□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Wfdc6bF6ULY1 148 aa13.3□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Coa6Q8BGD8 79 aa13.29□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Fras1Q80T14 4010 aa13.28□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Dnah1E9Q8T7 4250 aa13.28□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Spink8Q09TK9 105 aa13.27□□□□□ -0.28
Hoxd1-201ENSMUST00000047793 Cdc42se1Q8BHL7 80 aa13.26□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Igkv8-19A0A0G2JFN8 121 aa13.25□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Huwe1Q7TMY8 4377 aaKnown RBP13.25□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Gm9508A0A1W2P7W0 230 aa13.24□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Vpreb3D3Z6J4 130 aa13.24□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 2310061N02RikQ9D6S9 174 aa13.23□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Obox2E9PXV9 151 aa13.22□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 Spint4Q9D263 159 aa13.22□□□□□ -0.29
Hoxd1-201ENSMUST00000047793 PscaP57096 123 aa13.19□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 U90926O08546 118 aa13.18□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 OxtP35454 125 aa13.18□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 Gm44790A0A0N4SV91 103 aa13.17□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 Fam104aA2A6P4 185 aa13.16□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 Igkv3-12A0A140T8P0 119 aa13.15□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 Dync2h1Q45VK7 4306 aa13.15□□□□□ -0.3
Hoxd1-201ENSMUST00000047793 Defa28D3Z1V9 94 aa13.14□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Gm17521F6QAC8 156 aa13.14□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Atox1O08997 68 aaKnown RBP13.12□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Dnah7bL7N1Y0 4068 aa13.12□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Chchd10Q7TNL9 138 aa13.1□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Fam168bQ80XQ8 194 aa13.1□□□□□ -0.31
Hoxd1-201ENSMUST00000047793 Igkv3-10A0A0G2JGN0 119 aa13.08□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 AI606181Q8C7B9 129 aa13.08□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Ryr1E9PZQ0 5035 aa13.08□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Gm20604F8WIA3 75 aa13.08□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Ube2bP63147 152 aa13.07□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Stab2Q8R4U0 2559 aa13.06□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 PlecQ9QXS1 4691 aaKnown RBP13.06□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Gm10197F6QEY5 67 aa13.04□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Gm21886J3QJU9 214 aa13.04□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Defb40Q70KL2 73 aa13.04□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Coa5Q99M07 74 aa13.04□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Sox16Q62247 57 aa13.03□□□□□ -0.32
Hoxd1-201ENSMUST00000047793 Bean1Q9EQG5 255 aa13.02□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 1700018G05RikA0A1B0GSI2 66 aa13□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 A0A286YE49 62 aa13□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 Gm10139O88245 57 aa12.99□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 Gm9507D3Z5T3 223 aa12.98□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 Nupr2Q497P3 102 aa12.98□□□□□ -0.33
Hoxd1-201ENSMUST00000047793 Ryr3A2AGL3 4863 aa12.95□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Dnah7aE9Q0T8 4024 aa12.95□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Zcchc13Q9D548 170 aa12.95□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Gm10837Q3UTT8 145 aa12.93□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Odf3bQ5M8M2 238 aa12.93□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 SycnQ8VCK7 134 aa12.93□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Ryr2E9Q401 4966 aaKnown RBP12.92□□□□□ -0.34
Hoxd1-201ENSMUST00000047793 Gm28230A0A0A0MQ91 144 aa12.89□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 Reg3aO09037 175 aa12.87□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 Gm9918Q8BUR5 174 aa12.87□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 Gm2310J3QNJ2 377 aa12.85□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 1700012A03RikQ9DAF1 130 aa12.85□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 Phxr4P15974 95 aa12.84□□□□□ -0.35
Hoxd1-201ENSMUST00000047793 1700074P13RikQ9D9G7 251 aa12.83□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Ube2aQ9Z255 152 aa12.83□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Defb12Q8K4N3 78 aa12.82□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Wfdc10Q3V2J9 124 aa12.82□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Ly6g6cQ9Z1Q4 126 aa12.82□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 4933415A04RikQ9D443 101 aa12.81□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Q8K1L6 76 aa12.79□□□□□ -0.36
Hoxd1-201ENSMUST00000047793 Plac8Q9JI48 112 aa12.77□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 Dnah7cA0A087WR13 4024 aa12.76□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 Dnah11E9Q7N9 4488 aa12.75□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 2310050C09RikG5E8Z3 280 aa12.74□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 Wfdc3Q14AE4 130 aa12.72□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 Wfdc13Q5DQQ6 81 aa12.72□□□□□ -0.37
Hoxd1-201ENSMUST00000047793 Rpl37aP61514 92 aa12.7□□□□□ -0.38
Hoxd1-201ENSMUST00000047793 Phf5aP83870 110 aaKnown RBP12.69□□□□□ -0.38
Hoxd1-201ENSMUST00000047793 Dnah9B1AR51 4484 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms