RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Znf414Q9DCK4 299 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 SetxA2AKX3 2646 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Gm10770F7D043 238 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Col4a6B1AVK5 1691 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 1700042G07RikB1AUF7 90 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Mp68P56379 58 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Gm9821Q8K076 103 aa4.42□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Gm12216A0A1W2P827 62 aa4.41□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Nup210Q9QY81 1886 aaKnown RBP4.41□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Gm10267M0QWD8 85 aa4.41□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Phf5aP83870 110 aaKnown RBP4.41□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Fgf23Q9EPC2 251 aa4.4□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Gm20538F6Z9R1 75 aa4.4□□□□□ -1.7
Ubr4-212ENSMUST00000165860 Abca12E9Q876 2595 aa4.4□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Znf706Q9D115 76 aaKnown RBP4.4□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Fn1P11276 2477 aaKnown RBP4.4□□□□□ -1.71
Ubr4-212ENSMUST00000165860 RetnlbQ99P86 105 aa4.4□□□□□ -1.71
Ubr4-212ENSMUST00000165860 6430550D23RikE9Q1X6 194 aa4.4□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Nsun4C4P6S0 806 aaKnown RBP4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Wfdc15aQ8BH89 80 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Fam19a3Q7TPG6 132 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Igkv8-28A0A0G2JE47 121 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Nbeal1E9PYP2 2688 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Q8K1L6 76 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Znf580Q9DB38 172 aa4.39□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Gm9925F6T2U3 160 aa4.38□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Wfdc12Q9JHY3 85 aa4.38□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Cdc42se2Q8BGH7 84 aa4.38□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Cep192E9Q4Y4 2514 aaKnown RBP4.38□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Pla2g2dQ9WVF6 144 aa4.38□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Ighv2-9-1A0A075B697 116 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Gm10490F6VBM2 120 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Wisp2Q9Z0G4 251 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Col4a5Q63ZW6 1691 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Odf3l2Q3TZ65 277 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Coa5Q99M07 74 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Gm10509O88255 85 aa4.37□□□□□ -1.71
Ubr4-212ENSMUST00000165860 1700056E22RikF7CNM6 234 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Wfdc13Q5DQQ6 81 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Sostdc1Q9CQN4 206 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Nupr2Q497P3 102 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Gm28374F6SG70 93 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Pla2g10Q9QXX3 151 aa4.36□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Sprr3O09116 238 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 PlaurP35456 327 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 3110070M22RikQ9DAQ7 118 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 A0A286YCN5 57 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 CnbpP53996 178 aaKnown RBP4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Zfand2aQ9JII7 171 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 4930519P11RikQ9CUJ8 166 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Wfdc11A2A5H7 82 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Gm4707V9GXN5 68 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Ly6c2P0CW03 131 aa4.35□□□□□ -1.71
Ubr4-212ENSMUST00000165860 PcntP48725 2898 aa4.34□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Ovol3D3YYM0 189 aa4.34□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Map1aQ9QYR6 2776 aa4.34□□□□□ -1.71
Ubr4-212ENSMUST00000165860 Defb18Q30KP5 85 aa4.34□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Wfdc17Q5SSJ1 76 aa4.34□□□□□ -1.72
Ubr4-212ENSMUST00000165860 CicQ924A2 2510 aa4.33□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Bahcc1Q3UHR0 2643 aa4.33□□□□□ -1.72
Ubr4-212ENSMUST00000165860 C130032M10RikQ8C888 123 aa4.33□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Gm9903Q8C9Y8 129 aa4.33□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Rai1Q61818 1889 aa4.33□□□□□ -1.72
Ubr4-212ENSMUST00000165860 E130116L18RikQ8BMV6 101 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Igkv8-27A0A0G2JF28 120 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Rnase1P00683 149 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Gm10837Q3UTT8 145 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Gm9922Q8C3P1 144 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Chchd7Q8K2Q5 85 aa4.32□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Chd6A3KFM7 2711 aa4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 SycnQ8VCK7 134 aa4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 FshbQ60687 130 aa4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Igkv8-19A0A0G2JFN8 121 aa4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Tns1E9Q0S6 1888 aaKnown RBP4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Defb37Q7TMD2 62 aa4.31□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Adm2Q7TNK8 150 aa4.3□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Chchd10Q7TNL9 138 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Smim29Q8R043 75 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Lmo4P61969 165 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 1600014C23RikQ9DAX4 101 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Pla2g1bQ9Z0Y2 146 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 PrlhG3UWC3 86 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 4933415A04RikQ9D443 101 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Ly6g6cQ9Z1Q4 126 aa4.29□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Sec61bQ9CQS8 96 aaKnown RBP4.28□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Ighv8-13A0A075B5Y0 101 aa4.28□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Psors1c2Q80ZC9 134 aa4.28□□□□□ -1.72
Ubr4-212ENSMUST00000165860 Gm17606F6ZL36 78 aa4.27□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm10226O88253 85 aa4.27□□□□□ -1.73
Ubr4-212ENSMUST00000165860 A730009L09RikA0A1B0GS82 72 aa4.27□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gpha2Q925Q5 128 aa4.27□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm17689B3GLJ4 109 aa4.26□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Lypd5Q9D7Z7 256 aa4.26□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Dmbt1Q60997 2085 aa4.26□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Reg3aO09037 175 aa4.26□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Mast4Q811L6 2618 aa4.26□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Notch1Q01705 2531 aa4.25□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Kiaa1549Q68FD9 1940 aa4.25□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Mrpl34Q99N91 92 aa4.25□□□□□ -1.73
Ubr4-212ENSMUST00000165860 1110002E22RikE0CYV9 1786 aa4.25□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms