RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 C530025M09RikF6RGA8 229 aa12.23□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Stab1Q8R4Y4 2571 aa12.23□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Cox7bP56393 80 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Xlr5cQ9JJR2 179 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Trav13-1A0A075B644 110 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 9430015G10RikA2ASP7 199 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Gm7138L7N2C3 230 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Pglyrp4Q0VB07 374 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Gm17509Q9CZ61 145 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Gm3238W4VSP7 230 aa12.22□□□□□ -0.45
Chmp6-201ENSMUST00000026434 Trav3-4A0A075B654 114 aa12.21□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Prh1P05142 261 aa12.21□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Hspg2Q05793 3707 aaKnown RBP12.2□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Igkv4-92A0A0B4J1I2 117 aa12.2□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Cox7b2Q9D2H1 82 aa12.2□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Q9DAQ5 155 aa12.2□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Lyrm7Q9DA03 104 aa12.19□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Gm36176A0A1W2P8D5 158 aa12.18□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Gm5153P01627 120 aa12.18□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Hbb-b2P02089 147 aa12.18□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Col6a5A6H584 2640 aa12.17□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Igkv8-16A0A0G2JDG9 121 aa12.16□□□□□ -0.46
Chmp6-201ENSMUST00000026434 CnbpP53996 178 aaKnown RBP12.16□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Gm10518F6UQQ9 182 aa12.15□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Gm10767Q3TQP0 103 aa12.15□□□□□ -0.46
Chmp6-201ENSMUST00000026434 Sslp1Q3UN54 99 aa12.15□□□□□ -0.46
Chmp6-201ENSMUST00000026434 PtprqP0C5E4 2300 aa12.15□□□□□ -0.47
Chmp6-201ENSMUST00000026434 ApcQ61315 2845 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Ighv13-2A0A0A6YWN3 119 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Ube2d4D3YUH6 135 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Gm5142Q8C5X9 133 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Cdip1Q9DB75 208 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Kmt2aP55200 3966 aa12.14□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Trav13-2A0A075B649 110 aa12.13□□□□□ -0.47
Chmp6-201ENSMUST00000026434 4930524J08RikQ9CUJ5 163 aa12.13□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Reg3dQ9QUS9 175 aa12.13□□□□□ -0.47
Chmp6-201ENSMUST00000026434 TnxbO35452 4006 aa12.12□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Srrm2Q8BTI8 2703 aaKnown RBP12.12□□□□□ -0.47
Chmp6-201ENSMUST00000026434 B9d2Q3UK10 175 aa12.11□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Defb29Q8BGW9 78 aa12.11□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Mrpl52Q9D0Y8 121 aa12.11□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Insl3O09107 122 aa12.1□□□□□ -0.47
Chmp6-201ENSMUST00000026434 MifP34884 115 aaKnown RBP12.1□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Znf414Q9DCK4 299 aa12.09□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Gm4707V9GXN5 68 aa12.09□□□□□ -0.47
Chmp6-201ENSMUST00000026434 Gm12057A0A087WR21 115 aa12.08□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Trav14-1A0A0G2JF94 121 aa12.08□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Tmem213Q08EA8 116 aa12.08□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Sprr4Q8CGN8 76 aa12.08□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Xcl1P47993 114 aa12.07□□□□□ -0.48
Chmp6-201ENSMUST00000026434 TeppQ6IMH0 216 aa12.07□□□□□ -0.48
Chmp6-201ENSMUST00000026434 5730596B20RikQ8BQ08 205 aa12.07□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Ufsp1Q9CZP0 217 aa12.07□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Ighv10-1A0A0B4J1J6 119 aa12.06□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Defa2P28309 93 aa12.06□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Gm10845Q3UNY9 185 aa12.06□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Camk2n2Q78WH7 79 aa12.05□□□□□ -0.48
Chmp6-201ENSMUST00000026434 BC048502Q80Y74 154 aa12.05□□□□□ -0.48
Chmp6-201ENSMUST00000026434 AY074887Q8R5F9 132 aa12.05□□□□□ -0.48
Chmp6-201ENSMUST00000026434 BatfO35284 125 aa12.05□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Gm10770F7D043 238 aa12.03□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Gm16485Q8C4B7 115 aa12.03□□□□□ -0.48
Chmp6-201ENSMUST00000026434 Igkv1-35A0A0G2JDE5 120 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Trav13n-2A0A0G2JF93 110 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 A730009L09RikA0A1B0GS82 72 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Gm9805F6YK59 57 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Gm17577J3QNF7 156 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Cdk2ap2Q9CPY4 127 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Wfdc12Q9JHY3 85 aa12.02□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Rpl39lQ9CQD0 51 aa12.01□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Dnah3Q8BW94 4083 aa12□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Rpl18aP62717 176 aaKnown RBP11.99□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Spata45Q9CVW4 97 aa11.99□□□□□ -0.49
Chmp6-201ENSMUST00000026434 1810062G17RikG3X8Y2 129 aa11.97□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Inafm2A0A1L1STD6 152 aa11.96□□□□□ -0.49
Chmp6-201ENSMUST00000026434 Gm11627A6PWP4 55 aa11.96□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Gm7137J3QMW1 236 aa11.96□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Dnah17Q69Z23 4481 aa11.94□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Dnah14A0A140LIJ4 4489 aa11.94□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Gm10735Q3US96 136 aa11.92□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Sprr1aQ62266 144 aa11.92□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Notch1Q01705 2531 aa11.91□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Igkv3-12A0A140T8P0 119 aa11.91□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Ifitm6A0A1B0GS75 124 aa11.91□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Klk12B2RVZ0 247 aa11.91□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Atp5eP56382 52 aa11.91□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Ighv10-3A0A075B5T6 119 aa11.9□□□□□ -0.5
Chmp6-201ENSMUST00000026434 Trav14d-3-dv8A0A075B619 120 aa11.9□□□□□ -0.5
Chmp6-201ENSMUST00000026434 2310034G01RikA0A286YDL3 209 aa11.89□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Gm7276Q3TYW4 209 aa11.89□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Elof1P60003 83 aa11.88□□□□□ -0.51
Chmp6-201ENSMUST00000026434 A0A286YCN5 57 aa11.87□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Dnah10D3YYQ8 4591 aa11.86□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Igkv8-26A0A075B5N5 123 aa11.86□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Igkv4-58A0A0G2JGI6 119 aa11.85□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Prol1E9PYQ4 312 aa11.85□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Igkv1-88A0A140T8N1 120 aa11.84□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Pde6gP09174 87 aa11.84□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Dnah6E9Q0B6 4144 aa11.84□□□□□ -0.51
Chmp6-201ENSMUST00000026434 Gm7102J3QQ10 178 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 171.1 ms