RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Wdr90Q6ZPG2 1874 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Greb1Q3UHK3 1954 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Znf575Q3TXZ1 239 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Fam240bJ3QMB3 78 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 DscamQ9ERC8 2013 aa5.62□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 P04941 107 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 P04944 107 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Fxyd1Q9Z239 92 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Parp4E9PYK3 1969 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 MyofQ69ZN7 2048 aaKnown RBP5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Eml6Q5SQM0 1958 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Cep290Q6A078 2472 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Jmjd1cQ69ZK6 2350 aa5.61□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 LctF8VPT3 1931 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Fxyd5P97808 178 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Nup210Q9QY81 1886 aaKnown RBP5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 P01630 113 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 PtprsB0V2N1 1907 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Ly75Q60767 1723 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 NmbQ9CR53 121 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Q9DAA7 145 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Tmem254aP0DN89 123 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Tmem254bP0DN90 123 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Tmem254cP0DN91 123 aa5.6□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm21886J3QJU9 214 aa5.59□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Sostdc1Q9CQN4 206 aa5.59□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm10226O88253 85 aa5.59□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Gm26566Q8CAC1 153 aa5.59□□□□□ -1.51
Rc3h1-202ENSMUST00000161609 Cnot1Q6ZQ08 2375 aaKnown RBP5.58□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 IgipA0A1B0GR74 53 aa5.57□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Gm6899Q3USS0 134 aa5.57□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Fam168bQ80XQ8 194 aa5.57□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Pla2g2dQ9WVF6 144 aa5.57□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 1700011M02RikB1AX35 88 aa5.56□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 A730015C16RikQ8C992 119 aa5.56□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 BtcQ05928 177 aa5.56□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 SrcapA0A087WQ44 3271 aa5.56□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 AtrxQ61687 2476 aaKnown RBP5.56□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Cd164Q9R0L9 197 aa5.55□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 LitafQ9JLJ0 161 aa5.55□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Nrxn2E9Q7X7 1710 aa5.55□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Prr12E9PYL2 2035 aaKnown RBP5.55□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Rnf185Q91YT2 192 aa5.55□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Pkd1l2Q7TN88 2461 aa5.54□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 7420426K07RikQ3UX66 186 aa5.54□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Brwd1Q921C3 2304 aa5.54□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 P04940 107 aa5.54□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Q8BTC1 67 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Ncor1Q60974 2453 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Krtap15-1Q9QZU5 150 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Tcrg-V5A0A0G2JGV5 113 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Gm10837Q3UTT8 145 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Zfp236S4R299 1847 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Rtl10D3YWW5 146 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 Gm17509Q9CZ61 145 aa5.53□□□□□ -1.52
Rc3h1-202ENSMUST00000161609 NpyP57774 97 aa5.52□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 TectaO08523 2155 aa5.52□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 A930009A15RikG3UYI6 118 aa5.52□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Ighv8-13A0A075B5Y0 101 aa5.52□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Vwa8Q8CC88 1905 aa5.52□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Odf3Q920N1 254 aa5.51□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm3443F7CCV5 94 aa5.51□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm9922Q8C3P1 144 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Plxna2P70207 1894 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 2310034G01RikA0A286YDL3 209 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 P04942 107 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 P04943 107 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Wisp3D3Z5L9 354 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 SnurfQ9WU12 71 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gvin1Q80SU7 2427 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm9821Q8K076 103 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 AgrnA2ASQ1 1950 aa5.5□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm5464Q3UY29 175 aa5.49□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Ntn5Q3UQ22 452 aa5.49□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm5142Q8C5X9 133 aa5.49□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 OxtP35454 125 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Q8C708 225 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 UqcrqQ9CQ69 82 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Cdc42se2Q8BGH7 84 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Trav4-3A0A0B4J1K1 110 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Arid2E9Q7E2 1828 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Snhg11Q4G0K9 87 aa5.48□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Gm5629P06327 117 aa5.47□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Col5a3Q9JLI2 1739 aa5.47□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 SonQ9QX47 2444 aaKnown RBP5.47□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 StrcQ8VIM6 1809 aa5.46□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Q9CX25 107 aa5.46□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Tmem131O70472 1877 aa5.46□□□□□ -1.53
Rc3h1-202ENSMUST00000161609 Abca2P41234 2434 aa5.46□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Ighv2-2A0A075B5P8 116 aa5.46□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 P01821 116 aa5.46□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Gm44790A0A0N4SV91 103 aa5.46□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Mrpl34Q99N91 92 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Ighv1-66A0A075B5X5 117 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Spata3Q9D9T6 193 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Eml5Q8BQM8 1977 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Hivep2Q3UHF7 2430 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Arhgap32Q811P8 2089 aa5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Sptan1P16546 2472 aaKnown RBP5.45□□□□□ -1.54
Rc3h1-202ENSMUST00000161609 Ep300B2RWS6 2412 aa5.45□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms