RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Ighv2-3A0A075B696 115 aa5.66□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Adm2Q7TNK8 150 aa5.66□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Fam19a3Q7TPG6 132 aa5.66□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Sostdc1Q9CQN4 206 aa5.66□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 LitafQ9JLJ0 161 aa5.66□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Sptan1P16546 2472 aaKnown RBP5.65□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Gm20661K7N787 53 aa5.65□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Dicer1Q8R418 1916 aa5.65□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Foxs1Q61574 329 aa5.65□□□□□ -1.5
Pcdh9-204ENSMUST00000193901 Ralgapa2A3KGS3 1872 aa5.65□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Rps28P62858 69 aaKnown RBP5.65□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Q9CX25 107 aa5.65□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 A0A286YCN5 57 aa5.64□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Wfdc12Q9JHY3 85 aa5.64□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 AtrxQ61687 2476 aaKnown RBP5.64□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm28230A0A0A0MQ91 144 aa5.64□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Ighv1-66A0A075B5X5 117 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 MsmpB1AWI6 139 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 6430550D23RikE9Q1X6 194 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm28374F6SG70 93 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 9130230L23RikQ8CC80 163 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Baz2aQ91YE5 1889 aaKnown RBP5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Ighv2-5A0A0A6YY69 116 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 P01674 108 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Prr14lE9Q7C4 1971 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm10643Q3URG9 111 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm5142Q8C5X9 133 aa5.63□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 A930002H24RikQ8C8Y3 163 aa5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Dock1Q8BUR4 1865 aa5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Heatr5aQ5PRF0 2038 aa5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Notch3Q61982 2318 aa5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Nsun4C4P6S0 806 aaKnown RBP5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm17509Q9CZ61 145 aa5.62□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Wfdc11A2A5H7 82 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Med12A2AGH6 2190 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Cdc42se2Q8BGH7 84 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Wnk1P83741 2377 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Loxhd1C8YR32 2068 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 AcacaQ5SWU9 2345 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Zfand2aQ9JII7 171 aa5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Myo5aQ99104 1853 aaKnown RBP5.61□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 4930519P11RikQ9CUJ8 166 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Myo16Q5DU14 1919 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Dock3Q8CIQ7 2027 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Pla2g5P97391 137 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Polr2kQ63871 58 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gpha2Q925Q5 128 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Scn5aQ9JJV9 2019 aa5.6□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm12057A0A087WR21 115 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm9949Q8C9F4 104 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Pla2g10Q9QXX3 151 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Reg3aO09037 175 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Gm10549Q3URY4 149 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Znf239P24399 201 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Defb50Q6TU36 73 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Q9DAA7 145 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 Hivep3A2A884 2348 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 LctF8VPT3 1931 aa5.59□□□□□ -1.51
Pcdh9-204ENSMUST00000193901 CriptO70333 101 aa5.58□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Myo9bQ9QY06 2114 aa5.58□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm21748Q3UE70 102 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Obsl1D3YYU8 1804 aaKnown RBP5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Ighv2-2A0A075B5P8 116 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 P01821 116 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 GrnP28798 589 aaKnown RBP5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Defb39Q70KL3 74 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 P01819 144 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 4930518I15RikQ3V2W7 57 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 CnfnQ6PCW6 111 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm10226O88253 85 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 1600014C23RikQ9DAX4 101 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Pla2g2dQ9WVF6 144 aa5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Sorl1O88307 2215 aaKnown RBP5.57□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm10999F6Q4M4 69 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Casp8ap2Q9WUF3 1962 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 CrygaP04345 174 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Prpf8Q99PV0 2335 aaKnown RBP5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Smr3aQ61900 147 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Cdc42se1Q8BHL7 80 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 P01659 112 aa5.56□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 TshbP12656 138 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 A530084C06RikQ3UTW2 186 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Ly6g6cQ9Z1Q4 126 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Myo7bQ99MZ6 2113 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 4930432M17RikQ3V0W9 174 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm10509O88255 85 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm26566Q8CAC1 153 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Fer1l5P0DM40 2038 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Zfhx2Q2MHN3 2562 aa5.55□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Crybg1A0A0G2JG52 2065 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Phf3B2RQG2 2025 aaKnown RBP5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Ighv8-13A0A075B5Y0 101 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Pkd1l3Q2EG98 2201 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Plxna1P70206 1894 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Gm9922Q8C3P1 144 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Mrpl34Q99N91 92 aa5.54□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 B230217C12RikE9Q3Z1 139 aa5.53□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Rtl10D3YWW5 146 aa5.53□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 CdsnQ7TPC1 561 aa5.53□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 Defb42Q8BVB5 75 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms