RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Rtl10D3YWW5 146 aa8.78□□□□□ -1
Ndc1-204ENSMUST00000139560 CrygdP04342 174 aa8.78□□□□□ -1
Ndc1-204ENSMUST00000139560 Ly6hQ9WUC3 139 aa8.78□□□□□ -1
Ndc1-204ENSMUST00000139560 4930470P17RikQ9D542 155 aa8.78□□□□□ -1
Ndc1-204ENSMUST00000139560 1110002E22RikE0CYV9 1786 aa8.78□□□□□ -1
Ndc1-204ENSMUST00000139560 CrygcQ61597 174 aa8.77□□□□□ -1.01
Ndc1-204ENSMUST00000139560 SrarpQ3ULG3 163 aa8.77□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Ash1lQ99MY8 2958 aa8.76□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Gm9925F6T2U3 160 aa8.76□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Gm2916Q9D9B9 127 aa8.76□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Ighv8-11A0A075B5X4 119 aa8.75□□□□□ -1.01
Ndc1-204ENSMUST00000139560 PrcdQ00LT2 53 aa8.75□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Kiaa1549Q68FD9 1940 aa8.75□□□□□ -1.01
Ndc1-204ENSMUST00000139560 CdsnQ7TPC1 561 aa8.75□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Usp24B1AY13 2617 aaKnown RBP8.75□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Atp6v0e2Q91XE7 81 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Rnase1P00683 149 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 P01820 115 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Rpl32P62911 135 aaKnown RBP8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Spink8Q09TK9 105 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Celsr1O35161 3034 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Trbv16A0A0B4J1H3 115 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Gm5878E9PUB3 99 aa8.74□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Spink4O35679 86 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Q99M08 65 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Inafm2A0A1L1STD6 152 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Spink13Q3UTS8 97 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Q9CX25 107 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Gm6899Q3USS0 134 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Srsf2Q62093 221 aaKnown RBP8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Sprr3O09116 238 aa8.73□□□□□ -1.01
Ndc1-204ENSMUST00000139560 1520401A03RikA0A0J9YVH6 598 aa8.72□□□□□ -1.01
Ndc1-204ENSMUST00000139560 4930546C10RikE9Q4Y3 121 aa8.72□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Cep192E9Q4Y4 2514 aaKnown RBP8.71□□□□□ -1.01
Ndc1-204ENSMUST00000139560 A0A286YCN5 57 aa8.71□□□□□ -1.01
Ndc1-204ENSMUST00000139560 Cox17P56394 63 aa8.71□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Q9D8Q6 235 aa8.71□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Fn1P11276 2477 aaKnown RBP8.71□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Higd2aQ9CQJ1 106 aa8.71□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Gcn1E9PVA8 2671 aaKnown RBP8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Smim1P0C8K7 78 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Rpl18aP62717 176 aaKnown RBP8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Rpl39lQ9CQD0 51 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 LhbO09108 141 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 BC048502Q80Y74 154 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Ighv1-11A0A0A6YWI9 117 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 1700010B08RikQ9DAI7 102 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Celsr3Q91ZI0 3301 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Akap13E9Q394 2776 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Cyyr1Q8VIH7 165 aa8.7□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Ighv2-3A0A075B696 115 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Gm3285A0A1W2P7U0 201 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Pla2g2cP48076 150 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 FryE9Q8I9 3020 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 P01823 113 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Gm26566Q8CAC1 153 aa8.69□□□□□ -1.02
Ndc1-204ENSMUST00000139560 SvipQ3UZP4 77 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 P01729 129 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 EnhoQ8K1D8 76 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Gm3618D3Z4P5 127 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Tmem254aP0DN89 123 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Tmem254bP0DN90 123 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Tmem254cP0DN91 123 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Atp5eP56382 52 aa8.68□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Ube2bP63147 152 aa8.67□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Wfdc12Q9JHY3 85 aa8.67□□□□□ -1.02
Ndc1-204ENSMUST00000139560 PrlhG3UWC3 86 aa8.66□□□□□ -1.02
Ndc1-204ENSMUST00000139560 P01745 121 aa8.66□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Fam222aQ6PGH4 453 aa8.66□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Ormdl1Q921I0 153 aa8.65□□□□□ -1.02
Ndc1-204ENSMUST00000139560 AtrQ9JKK8 2635 aa8.65□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Hcfc1Q61191 2045 aaKnown RBP8.65□□□□□ -1.02
Ndc1-204ENSMUST00000139560 Reg3bP35230 175 aa8.65□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Tm2d2Q8R0I4 213 aa8.65□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Crip2Q9DCT8 208 aaKnown RBP8.65□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Pglyrp1O88593 182 aa8.64□□□□□ -1.03
Ndc1-204ENSMUST00000139560 MgaA2AWL7 3003 aaKnown RBP8.64□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Notch1Q01705 2531 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ighv1-66A0A075B5X5 117 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 PlaurP35456 327 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Tmem258P61166 79 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ighv1-85A0A075B5Y6 117 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Gm10135F6TEE5 83 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Camk2n2Q78WH7 79 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Vps13cQ8BX70 3748 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Gm10647E9Q8X0 124 aa8.63□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Zfhx4Q9JJN2 3550 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Polr2kQ63871 58 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 5730596B20RikQ8BQ08 205 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Esm1Q9QYY7 184 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ighv1-75A0A075B5Y2 117 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 P01755 137 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Prr15lQ8JZM2 100 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Pla2g2dQ9WVF6 144 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Tcte2E9PY37 120 aa8.62□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ufsp1Q9CZP0 217 aa8.61□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Trav9n-4A0A075B631 113 aa8.61□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ebi3O35228 228 aa8.61□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Rnf152Q8BG47 203 aa8.61□□□□□ -1.03
Ndc1-204ENSMUST00000139560 Ighv1-62-1A0A075B5U3 116 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms