RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Prp2P05143 317 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Smim9Q3V0X1 137 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Rhox4eQ504P9 205 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 OstcQ78XF5 149 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 A330070K13RikQ8CA53 115 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Scgb3a2Q920H1 91 aa9.01□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Igkv6-13A0A0G2JGY3 119 aa9□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Nkx6-2D3Z4R4 277 aa9□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 P06334 169 aa9□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Ndufa6Q9CQZ5 131 aaKnown RBP9□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Plac8l1Q08EJ0 177 aa8.99□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Khdc1cQ4KL78 166 aa8.99□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Ndufb11O09111 151 aa8.98□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 PkigO70139 76 aa8.98□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Atp5iQ06185 71 aaKnown RBP8.98□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Q24JP4 165 aa8.98□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Tmem14cQ9CQN6 114 aa8.98□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Igkv4-78A0A0A6YYE5 119 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Gm21616B6ZB74 166 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Gm21874J3QNZ6 232 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Gm5629P06327 117 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Tmem241Q3UME2 297 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 Trav3-3Q5R1C3 114 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 AamdcQ8R0P4 122 aa8.97□□□□□ -0.97
Ccdc88c-204ENSMUST00000223097 P01819 144 aa8.96□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Twist1P26687 206 aa8.96□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Slc25a20Q9Z2Z6 301 aaKnown RBP8.96□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm14214V9GX35 225 aa8.96□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav14n-3A0A075B645 120 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav7-4A0A075B6C1 113 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Adcyap1O70176 175 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 P18527 97 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Cd24P24807 76 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Pex7P97865 318 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav7d-4Q5R1H9 113 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Defb9Q8R2I6 67 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Ssna1Q9JJ94 119 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Snai3Q9QY31 287 aa8.95□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Tcrg-C1A0A075B5Z0 172 aa8.94□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm28044L7N1X0 119 aa8.94□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Tcrg-C3L7N479 172 aa8.94□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 P01823 113 aa8.94□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Tmed6Q9CQG0 239 aa8.94□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav7n-4A0A075B620 113 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav9n-4A0A075B631 113 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm11562A0PK51 136 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm4744D3Z3S5 154 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 P01896 185 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 PigyP0C1P0 71 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Sprr1aQ62266 144 aa8.93□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 CnfnQ6PCW6 111 aa8.92□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Btf3l4Q9CQH7 158 aaKnown RBP8.92□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm26938S4R185 226 aa8.92□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Trav14d-1A0A075B6B1 121 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Mrps26Q80ZS3 200 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 March3Q8BRX9 218 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Q9CR34 168 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 MobpQ9D2P8 170 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Sec11cQ9D8V7 192 aa8.91□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 NbdyA0A0N4SUI7 68 aa8.9□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Esp4A8R0T8 117 aa8.9□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 NpsP0C0P8 89 aa8.9□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Anapc16Q9CPV2 110 aa8.9□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Bola1Q9D8S9 137 aaKnown RBP8.9□□□□□ -0.98
Ccdc88c-204ENSMUST00000223097 Gm45785A0A1B0GT05 94 aa8.89□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Q8CF25 301 aa8.89□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Commd5Q8R395 224 aa8.89□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Carhsp1Q9CR86 148 aa8.89□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Ighv2-9-1A0A075B697 116 aa8.88□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Gm14325A2AW67 498 aa8.88□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 SpinklQ8CEK3 90 aa8.88□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Olfr1118A0A0J9YUE7 307 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Umad1E0CX23 159 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 1810011H11RikE9PVZ2 95 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Esp3J3QN49 87 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Gm10334Q792Y8 246 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Cdc42se2Q8BGH7 84 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Gm9903Q8C9Y8 129 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Gm16223Q8CBM3 117 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Phpt1Q9DAK9 124 aa8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Tagln2Q9WVA4 199 aaKnown RBP8.87□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 P01793 123 aa8.86□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Borcs7Q9CRC6 105 aa8.86□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Omt2bD3YX29 119 aa8.85□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 TtrP07309 147 aa8.85□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Znf664Q4VA44 261 aa8.85□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Smco4Q9JIS3 59 aa8.85□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Ctdsp1P58466 261 aa8.84□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Sprr4Q8CGN8 76 aa8.84□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Psmg3Q9CZH3 122 aa8.84□□□□□ -0.99
Ccdc88c-204ENSMUST00000223097 Gm11444F6QMA6 170 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 P01736 120 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 GhrhP16043 103 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Gpx7Q99LJ6 186 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Tmem223Q9CQE2 199 aaKnown RBP8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Q9CRC3 126 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Ramp1Q9WTJ5 148 aa8.83□□□□□ -1
Ccdc88c-204ENSMUST00000223097 A730009L09RikA0A1B0GS82 72 aa8.82□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Esp38A8R0X1 80 aa8.82□□□□□ -1
Ccdc88c-204ENSMUST00000223097 Gm10203F6QJ09 66 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms