RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vamp8O70404 101 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Gata1P17679 413 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Gm21370Q3T9V6 190 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Trdv5A0A075B661 115 aa11.38□□□□□ -0.59
Trim39-203ENSMUST00000113706 Q5BN45 167 aa11.38□□□□□ -0.59
Trim39-203ENSMUST00000113706 Morn3Q8C5T4 241 aa11.38□□□□□ -0.59
Trim39-203ENSMUST00000113706 Tenm1Q9WTS4 2731 aa11.38□□□□□ -0.59
Trim39-203ENSMUST00000113706 Nbeal2Q6ZQA0 2742 aa11.38□□□□□ -0.59
Trim39-203ENSMUST00000113706 Fam19a4Q7TPG5 135 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Cysltr1Q99JA4 352 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Nop10Q9CQS2 64 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Igkv4-91A0A075B5L2 119 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Cox7cP17665 63 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Tmem238A9JSM3 176 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Nat8b-psE0CYC6 232 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Gm26602M0QWA4 95 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Defa13P50711 93 aa11.37□□□□□ -0.59
Trim39-203ENSMUST00000113706 Iglc1A0A0G2JE99 106 aa11.36□□□□□ -0.59
Trim39-203ENSMUST00000113706 P01843 105 aa11.36□□□□□ -0.59
Trim39-203ENSMUST00000113706 Mtatp8P03930 67 aa11.36□□□□□ -0.59
Trim39-203ENSMUST00000113706 Ifitm1Q9D103 106 aa11.35□□□□□ -0.59
Trim39-203ENSMUST00000113706 Gm45753A0A1C7CYU8 86 aa11.35□□□□□ -0.59
Trim39-203ENSMUST00000113706 P84751 237 aa11.35□□□□□ -0.59
Trim39-203ENSMUST00000113706 Trav7-2Q5R1I3 112 aa11.35□□□□□ -0.59
Trim39-203ENSMUST00000113706 Atp5lQ9CPQ8 103 aa11.35□□□□□ -0.59
Trim39-203ENSMUST00000113706 CrygfQ9CXV3 174 aa11.34□□□□□ -0.59
Trim39-203ENSMUST00000113706 S100a8P27005 89 aa11.33□□□□□ -0.59
Trim39-203ENSMUST00000113706 Mpv17l2Q8VIK2 200 aa11.33□□□□□ -0.59
Trim39-203ENSMUST00000113706 Hivep3A2A884 2348 aa11.33□□□□□ -0.59
Trim39-203ENSMUST00000113706 Chchd7Q8K2Q5 85 aa11.33□□□□□ -0.6
Trim39-203ENSMUST00000113706 LeprotO89013 131 aa11.32□□□□□ -0.6
Trim39-203ENSMUST00000113706 March3Q8BRX9 218 aa11.32□□□□□ -0.6
Trim39-203ENSMUST00000113706 Triap1Q9D8Z2 76 aa11.32□□□□□ -0.6
Trim39-203ENSMUST00000113706 Ighv2-6-8A0A0A6YWY9 116 aa11.32□□□□□ -0.6
Trim39-203ENSMUST00000113706 Trav4n-4A0A075B615 110 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 GfyJ3KML8 504 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 Dpm2Q9Z324 84 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 Smr3aQ61900 147 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 Tmem97Q8VD00 176 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 3110070M22RikQ9DAQ7 118 aa11.31□□□□□ -0.6
Trim39-203ENSMUST00000113706 Igkv4-78A0A0A6YYE5 119 aa11.3□□□□□ -0.6
Trim39-203ENSMUST00000113706 Atxn7l1Q9CZ05 146 aa11.3□□□□□ -0.6
Trim39-203ENSMUST00000113706 Phlda3Q9WV95 125 aa11.3□□□□□ -0.6
Trim39-203ENSMUST00000113706 Ube2d1P61080 147 aaKnown RBP11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Brwd1Q921C3 2304 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Fn1P11276 2477 aaKnown RBP11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Hivep1Q03172 2688 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Esp24A8R0V6 68 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Gm9887F6RFI0 207 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 CrygdP04342 174 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 CrygeQ03740 174 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Klk5Q9D140 293 aa11.29□□□□□ -0.6
Trim39-203ENSMUST00000113706 Tcrg-C1A0A075B5Z0 172 aa11.28□□□□□ -0.6
Trim39-203ENSMUST00000113706 Spink13Q3UTS8 97 aa11.28□□□□□ -0.6
Trim39-203ENSMUST00000113706 Rbmxl2Q9DAE2 385 aaKnown RBP11.28□□□□□ -0.6
Trim39-203ENSMUST00000113706 PolP10400 120 aa11.28□□□□□ -0.6
Trim39-203ENSMUST00000113706 Gm21748Q3UE70 102 aa11.28□□□□□ -0.6
Trim39-203ENSMUST00000113706 Gm17472A0A075B683 117 aa11.27□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ighv1-11A0A0A6YWI9 117 aa11.27□□□□□ -0.61
Trim39-203ENSMUST00000113706 Scgb1b24B1B0N6 92 aa11.27□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ighv8-12A0A0G2JDE1 119 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Pxt1Q8K459 51 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Mfap4Q9D1H9 257 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 HilpdaQ9JLS0 64 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ndufa3Q9CQ91 84 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Stab1Q8R4Y4 2571 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm10322F7D7I4 111 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Cfap126Q6P8X9 189 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gpha2Q925Q5 128 aa11.26□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ighv1-72P01751 139 aa11.25□□□□□ -0.61
Trim39-203ENSMUST00000113706 Rpl36aP83882 106 aaKnown RBP11.25□□□□□ -0.61
Trim39-203ENSMUST00000113706 Dmrt3Q80WT2 476 aa11.25□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm9747Q810H1 104 aa11.25□□□□□ -0.61
Trim39-203ENSMUST00000113706 Pgpep1Q9ESW8 209 aa11.25□□□□□ -0.61
Trim39-203ENSMUST00000113706 Nsd1O88491 2588 aaKnown RBP11.24□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gemin7Q9CWY4 129 aa11.24□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ube2d3P61079 147 aa11.24□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ube2d2P62838 147 aa11.24□□□□□ -0.61
Trim39-203ENSMUST00000113706 Trav9d-3A0A075B695 113 aa11.23□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm9242J3QNY1 357 aa11.23□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm9513B3GLJ6 99 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm7257D3YX25 99 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Ccl25O35903 144 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Tspan13Q9D8C2 204 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 P01811 117 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm26920S4R2A5 56 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 C920008G01RikA0A0B4J1N1 112 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Lect2O88803 151 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Eif4ebp1Q60876 117 aa11.22□□□□□ -0.61
Trim39-203ENSMUST00000113706 Esp4A8R0T8 117 aa11.21□□□□□ -0.61
Trim39-203ENSMUST00000113706 Gm35549A0A0N4SUS7 141 aa11.21□□□□□ -0.62
Trim39-203ENSMUST00000113706 Gm6812B1AXU1 112 aa11.21□□□□□ -0.62
Trim39-203ENSMUST00000113706 Rbmy1bQ60990 380 aa11.21□□□□□ -0.62
Trim39-203ENSMUST00000113706 Q8R092 253 aa11.21□□□□□ -0.62
Trim39-203ENSMUST00000113706 Srsf9Q9D0B0 222 aaKnown RBP11.21□□□□□ -0.62
Trim39-203ENSMUST00000113706 Dand5Q76LW6 185 aa11.2□□□□□ -0.62
Trim39-203ENSMUST00000113706 Gatd1Q8BFQ8 220 aa11.2□□□□□ -0.62
Trim39-203ENSMUST00000113706 Pla2g1bQ9Z0Y2 146 aa11.2□□□□□ -0.62
Trim39-203ENSMUST00000113706 P01729 129 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 P01896 185 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 73.8 ms