RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Snai3Q9QY31 287 aa5.35□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Snrpd3P62320 126 aaKnown RBP5.35□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Ang4Q3TMQ6 144 aa5.35□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Trav6d-4Q5R1I0 115 aa5.35□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Wdr86D3Z757 380 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Gm10320E9PW43 113 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Serp1Q9Z1W5 66 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Cmya5Q70KF4 3739 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Cacna1hO88427 2365 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Zfhx2Q2MHN3 2562 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Gm12353A2AGJ4 60 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Rpl28P41105 137 aaKnown RBP5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Znf575Q3TXZ1 239 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Fam229bQ8CF36 80 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Cd164Q9R0L9 197 aa5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Sptbn1Q62261 2363 aaKnown RBP5.34□□□□□ -1.55
Cntn1-202ENSMUST00000068378 Iqcf6G3UWF2 157 aa5.34□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01806 116 aa5.34□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01821 116 aa5.34□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Cacna1eQ61290 2272 aa5.34□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ighv10-3A0A075B5T6 119 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01795 144 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm12888Q3UW77 119 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Timm17bQ9Z0V7 172 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm15557A6PWY0 234 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm11011D3Z3L9 86 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Smim26Q3V460 107 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Q9DAS2 200 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Wisp2Q9Z0G4 251 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Igkv14-130A0A0G2JF45 117 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Lect2O88803 151 aa5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 CnbpP53996 178 aaKnown RBP5.33□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ighv1-58A0A075B5W9 117 aa5.32□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Defa28D3Z1V9 94 aa5.32□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Q5BN45 167 aa5.32□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Obox2E9PXV9 151 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01680 129 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Fhl1P97447 280 aaKnown RBP5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Chchd2Q9D1L0 153 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Krtap16-1A2A5X5 502 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Fam104aA2A6P4 185 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ighv1-66A0A075B5X5 117 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01643 108 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm5629P06327 117 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm26566Q8CAC1 153 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Mrps36Q9CQX8 102 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Fmc1Q9CR13 113 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 BikO70337 150 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 1700012A03RikQ9DAF1 130 aa5.31□□□□□ -1.56
Cntn1-202ENSMUST00000068378 NbeaQ9EPN1 2936 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Trav4-4-dv10A0A075B651 110 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Igkv6-23A0A140T8N5 115 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm2564F6Z9S8 108 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ccl19O70460 108 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Defb10Q8R2I8 73 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Srxn1Q9D975 136 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Znf414Q9DCK4 299 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Armcx4E9PWM3 2356 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ube2d4D3YUH6 135 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm21974F6W3F3 119 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 1700056E22RikF7CNM6 234 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Rbm3O89086 153 aaKnown RBP5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 4930415O20RikQ8CDT5 131 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 4930535I16RikQ9CUI2 172 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Trav11A0A0B4J1J9 114 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Rnase4Q9JJH1 148 aa5.3□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Reg3gO09049 174 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 P01745 121 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Mob4Q6PEB6 225 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Cysrt1Q9D1E4 142 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Zzef1Q5SSH7 2924 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Pglyrp1O88593 182 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Ros1Q78DX7 2340 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 A930002H24RikQ8C8Y3 163 aa5.29□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Igkv20-101-2A0A0G2JDU3 113 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Igkv6-13A0A0G2JGY3 119 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Igkv14-100A0A0G2JG36 117 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Rpl39P62892 51 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Spint4Q9D263 159 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Rnase2aQ8K196 155 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Mrpl35Q9CQL6 188 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Fstl3Q9EQC7 256 aa5.28□□□□□ -1.56
Cntn1-202ENSMUST00000068378 Gm20219A0A1B0GRQ3 87 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Inafm2A0A1L1STD6 152 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Gm17521F6QAC8 156 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Cd59bP58019 129 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Gm10837Q3UTT8 145 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 OtosQ8R448 89 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Pcbd1P61458 104 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 MplkipQ9D011 178 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Q9DAB9 146 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Zfp407G3UVV3 2246 aa5.27□□□□□ -1.57
Cntn1-202ENSMUST00000068378 F8Q06194 2319 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Znrf1Q91V17 227 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 EppinQ9DA01 134 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 LystP97412 3788 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Trav4-3A0A0B4J1K1 110 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Gm10521E9PZK0 135 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Gm10160F6Y577 67 aa5.26□□□□□ -1.57
Cntn1-202ENSMUST00000068378 Gm33815A0A087WNV3 176 aa5.26□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms