RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Foxi2Q3I5G5 311 aa7.22□□□□□ -1.25
Rnft1-201ENSMUST00000020827 Polr2kQ63871 58 aa7.22□□□□□ -1.25
Rnft1-201ENSMUST00000020827 Ndufa4Q62425 82 aaKnown RBP7.22□□□□□ -1.25
Rnft1-201ENSMUST00000020827 AhspQ9CY02 102 aa7.22□□□□□ -1.25
Rnft1-201ENSMUST00000020827 A530064D06RikQ8BNV8 229 aa7.21□□□□□ -1.25
Rnft1-201ENSMUST00000020827 Atp6v0bQ91V37 205 aa7.21□□□□□ -1.25
Rnft1-201ENSMUST00000020827 Triap1Q9D8Z2 76 aa7.21□□□□□ -1.25
Rnft1-201ENSMUST00000020827 Ighv12-3A0A075B5T1 117 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Ighv1-66A0A075B5X5 117 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm45753A0A1C7CYU8 86 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 RhohQ9D3G9 191 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Synj2bpQ9D6K5 145 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Josd1Q9DBJ6 202 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm20730A0A075B5J6 119 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 RetnQ99P87 114 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Vps25Q9CQ80 176 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tmem14cQ9CQN6 114 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm11565A2A4M7 156 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm20517G3UVU6 152 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Eif4ebp3Q80VV3 101 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 4930474N05RikQ8BVR5 218 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Pradc1Q9D9N8 188 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 CtrlQ9ER05 264 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm26920S4R2A5 56 aa7.21□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Defb45Q3V490 66 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Fam19a4Q7TPG5 135 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Crip2Q9DCT8 208 aaKnown RBP7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Ccdc71lE9Q4T4 218 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Sap30O88574 220 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Csn3P06796 181 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tmem170bP86050 132 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Ighv1-75A0A075B5Y2 117 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 ColqO35348 457 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Smim1P0C8K7 78 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Krtap26-1Q9D7N2 215 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tcf24V9GWT9 166 aa7.2□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tex48Q9DA81 110 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Pglyrp1O88593 182 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Ly6g5bQ8K1T4 194 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Q9CX63 252 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 A730046J19RikA0A1B0GSN8 89 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Sub1P11031 127 aaKnown RBP7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Vmn1r197Q8R265 298 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm26602M0QWA4 95 aa7.19□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Iglc1A0A0G2JE99 106 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 P01843 105 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gng4P50153 75 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Rps20P60867 119 aaKnown RBP7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Cks1brtQ3UNC9 96 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Chac1Q8R3J5 223 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Sh2d1aO88890 126 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Prh1P05142 261 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 P84751 237 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Ndufc2Q9CQ54 120 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tnfrsf23Q9ER63 176 aa7.18□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Lgals6O54891 301 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 P01811 117 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 C920008G01RikA0A0B4J1N1 112 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm36176A0A1W2P8D5 158 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Mrpl35Q9CQL6 188 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Lyzl4Q9D925 145 aa7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Srsf9Q9D0B0 222 aaKnown RBP7.17□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Mfap4Q9D1H9 257 aa7.16□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Igkv4-78A0A0A6YYE5 119 aa7.16□□□□□ -1.26
Rnft1-201ENSMUST00000020827 1500011B03RikQ3TTH7 73 aa7.16□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tmem263Q9DAM7 115 aa7.16□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Gm10542F6XDR3 90 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Tcrg-C3L7N479 172 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 P01837 106 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 P03985 172 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Spink1P09036 80 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Znf580Q9DB38 172 aa7.15□□□□□ -1.26
Rnft1-201ENSMUST00000020827 Smim10l1A0A087WNQ7 89 aa7.15□□□□□ -1.27
Rnft1-201ENSMUST00000020827 BC025920Q3US60 128 aa7.15□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Tmem97Q8VD00 176 aa7.15□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Cend1Q9JKC6 149 aa7.15□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Igkv4-68A0A0B4J1I7 117 aa7.15□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Gm8439G3UWA7 96 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Rnase1P00683 149 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Runx1Q03347 451 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Q9D8Q6 235 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 P01729 129 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Q5BN45 167 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 4930564D02RikQ9D4S4 103 aa7.14□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Gm35549A0A0N4SUS7 141 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 PlnP61014 52 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Dnah3Q8BW94 4083 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Ighv14-1A0A075B5R4 117 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Dand5Q76LW6 185 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Cd99Q8VCN6 175 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Hsbp1l1B2RXB2 72 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Hrct1Q9D6B9 109 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Cd164l2Q9D6W7 172 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Spcs1Q9D958 161 aa7.13□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Rpl35aO55142 110 aa7.12□□□□□ -1.27
Rnft1-201ENSMUST00000020827 P06334 169 aa7.12□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Rmi2Q3UPE3 149 aa7.12□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Plac1Q9JI83 173 aa7.12□□□□□ -1.27
Rnft1-201ENSMUST00000020827 Fam110dQ80X91 271 aa7.12□□□□□ -1.27
Rnft1-201ENSMUST00000020827 BatfO35284 125 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms