RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Runx1Q03347 451 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Rmi2Q3UPE3 149 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Defb29Q8BGW9 78 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Mlst8Q9DCJ1 326 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Bex1Q9R224 128 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 P01837 106 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Fam24aQ8CF27 98 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Wfdc2Q9DAU7 174 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Arhgap21Q6DFV3 1944 aa12.96□□□□□ -0.34
Cux1-206ENSMUST00000176172 P01748 117 aa12.96□□□□□ -0.34
Cux1-206ENSMUST00000176172 Hoxd3P09027 433 aa12.96□□□□□ -0.34
Cux1-206ENSMUST00000176172 Pip4p1Q3TWL2 284 aa12.96□□□□□ -0.34
Cux1-206ENSMUST00000176172 BC067074F6RXI4 2391 aa12.96□□□□□ -0.34
Cux1-206ENSMUST00000176172 PemtQ61907 199 aa12.95□□□□□ -0.34
Cux1-206ENSMUST00000176172 Ighv13-2A0A0A6YWN3 119 aa12.95□□□□□ -0.34
Cux1-206ENSMUST00000176172 Trbv16A0A0B4J1H3 115 aa12.95□□□□□ -0.34
Cux1-206ENSMUST00000176172 Oxld1Q9CR10 201 aa12.95□□□□□ -0.34
Cux1-206ENSMUST00000176172 Znf672Q99LH4 468 aa12.95□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm20730A0A075B5J6 119 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm4861Q8C5A4 106 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Timm17aQ9Z0V8 171 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Tln1P26039 2541 aaKnown RBP12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Ighv2-7A0A075B5Q8 116 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Igkv6-13A0A0G2JGY3 119 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Inafm2A0A1L1STD6 152 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Vsig4F6TUL9 280 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Pkd1l2Q7TN88 2461 aa12.94□□□□□ -0.34
Cux1-206ENSMUST00000176172 Col8a2P25318 699 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Plscr4P58196 326 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm17455G3UW87 128 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 SelenowP63300 88 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm9936Q8C864 160 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Ighv1-53A0A075B5W3 117 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Igkv4-78A0A0A6YYE5 119 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 P01658 132 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Clec4b2Q67DU8 208 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Prp2P05143 317 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Cox7cP17665 63 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Atp5g3P56384 141 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Atp5g1Q9CR84 136 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 MplkipQ9D011 178 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Wfdc15bQ9JHY4 80 aa12.93□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm9913Q8BQQ2 135 aa12.92□□□□□ -0.34
Cux1-206ENSMUST00000176172 Ly6g5bQ8K1T4 194 aa12.92□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm21060J3KMU4 56 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Egr2P08152 470 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Atp6v0e2Q91XE7 81 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Ighv12-3A0A075B5T1 117 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Lst1O08843 95 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Gm9958Q8C9U4 106 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Lrrk2Q5S006 2527 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Igkv4-57A0A0A6YYE7 117 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Foxi2Q3I5G5 311 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Fam19a4Q7TPG5 135 aa12.91□□□□□ -0.34
Cux1-206ENSMUST00000176172 Arid1bE9Q4N7 2244 aa12.9□□□□□ -0.34
Cux1-206ENSMUST00000176172 Cox7a1P56392 80 aa12.9□□□□□ -0.34
Cux1-206ENSMUST00000176172 HelzQ6DFV5 1964 aaKnown RBP12.9□□□□□ -0.34
Cux1-206ENSMUST00000176172 Trbv13-1A0A0B4J1P8 112 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 B230307C23RikQ8BLB2 64 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Zfp951A0A087WRH0 451 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Ppp1r32Q148A4 427 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Trav4d-3A0A075B625 110 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Pet100P0DJE0 76 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Odf3l1Q810P2 275 aa12.89□□□□□ -0.35
Cux1-206ENSMUST00000176172 Sdk1Q3UH53 2193 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 Glrp1E9Q9S8 174 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 1810032O08RikE9PZV8 113 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 Iglv1A0A075B663 117 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 OdaphJ3QNT8 126 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 Ndufs7Q9DC70 224 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 PrcdQ00LT2 53 aa12.88□□□□□ -0.35
Cux1-206ENSMUST00000176172 Q9CX25 107 aa12.87□□□□□ -0.35
Cux1-206ENSMUST00000176172 Odf3Q920N1 254 aa12.87□□□□□ -0.35
Cux1-206ENSMUST00000176172 Dennd4cA6H8H2 1906 aa12.87□□□□□ -0.35
Cux1-206ENSMUST00000176172 Abca2P41234 2434 aa12.87□□□□□ -0.35
Cux1-206ENSMUST00000176172 Ighv1-62-2A0A0A6YXZ4 119 aa12.87□□□□□ -0.35
Cux1-206ENSMUST00000176172 Lmo4P61969 165 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 Rpl39P62892 51 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 Gm5468Q8C3D3 155 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 Col5a3Q9JLI2 1739 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 NrgnP60761 78 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 Cfap126Q6P8X9 189 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 PtprsB0V2N1 1907 aa12.86□□□□□ -0.35
Cux1-206ENSMUST00000176172 P01745 121 aa12.85□□□□□ -0.35
Cux1-206ENSMUST00000176172 Defa27F2Z403 93 aa12.85□□□□□ -0.35
Cux1-206ENSMUST00000176172 BB014433Q8C5R5 389 aa12.85□□□□□ -0.35
Cux1-206ENSMUST00000176172 Sptbn4E9PX29 2561 aa12.85□□□□□ -0.35
Cux1-206ENSMUST00000176172 4930546C10RikE9Q4Y3 121 aa12.84□□□□□ -0.35
Cux1-206ENSMUST00000176172 Gm5878E9PUB3 99 aa12.84□□□□□ -0.35
Cux1-206ENSMUST00000176172 Gm14137Q8CE97 175 aa12.84□□□□□ -0.35
Cux1-206ENSMUST00000176172 Ube2bP63147 152 aa12.84□□□□□ -0.35
Cux1-206ENSMUST00000176172 Tm2d2Q8R0I4 213 aa12.84□□□□□ -0.35
Cux1-206ENSMUST00000176172 P01674 108 aa12.83□□□□□ -0.35
Cux1-206ENSMUST00000176172 Nup210Q9QY81 1886 aaKnown RBP12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 Eml6Q5SQM0 1958 aa12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 C920008G01RikA0A0B4J1N1 112 aa12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 Rnase1P00683 149 aa12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 Ndufa4l2Q4FZG9 87 aa12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 PkigO70139 76 aa12.83□□□□□ -0.36
Cux1-206ENSMUST00000176172 Sprr3O09116 238 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms