RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ccl25O35903 144 aa12.57□□□□□ -0.4
Ubr3-201ENSMUST00000055758 RhohQ9D3G9 191 aa12.57□□□□□ -0.4
Ubr3-201ENSMUST00000055758 NpwA0A1L1STR8 176 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Gm20878L7N244 103 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Znrf2Q71FD5 238 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Srsf2Q62093 221 aaKnown RBP12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 P01791 123 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Pgpep1lQ9CWB5 130 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 LenepQ9WVB6 61 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 BC067074F6RXI4 2391 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Ighv8-8A0A0A6YXQ0 119 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Tomm6Q9CQN3 74 aa12.56□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Igkv3-10A0A0G2JGN0 119 aa12.55□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Cd24P24807 76 aa12.55□□□□□ -0.4
Ubr3-201ENSMUST00000055758 BC048562Q80ZQ7 204 aa12.55□□□□□ -0.4
Ubr3-201ENSMUST00000055758 4930415O20RikQ8CDT5 131 aa12.55□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Ndufa4Q62425 82 aaKnown RBP12.55□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Igkv3-3A0A140T8Q0 119 aa12.54□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Igkv3-4A0A140T8Q4 119 aa12.54□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Atp6v0e1Q9CQD8 81 aa12.54□□□□□ -0.4
Ubr3-201ENSMUST00000055758 BC035044E0CXF8 138 aa12.54□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Pygo1Q9D0P5 417 aa12.54□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Vsig4F6TUL9 280 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Spg11Q3UHA3 2430 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Ypel3P61237 119 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Mbd6Q3TY92 1003 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Wfdc10Q3V2J9 124 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Timm17aQ9Z0V8 171 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 MgamB5THE2 1827 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Gm10762Q9CZN6 115 aa12.53□□□□□ -0.4
Ubr3-201ENSMUST00000055758 P01657 111 aa12.52□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Wfdc2Q9DAU7 174 aa12.52□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Gm33815A0A087WNV3 176 aa12.52□□□□□ -0.4
Ubr3-201ENSMUST00000055758 Mlst8Q9DCJ1 326 aa12.52□□□□□ -0.4
Ubr3-201ENSMUST00000055758 H2al1kJ3QP08 105 aa12.52□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Olfr313Q5NC55 308 aa12.52□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Inafm1E9PV59 130 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Ep300B2RWS6 2412 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Ly6c1P0CW02 131 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Gm12830F6XVH0 157 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Vpreb1P13372 142 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Colca2F8VPY8 239 aa12.51□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Rhno1Q8K3A4 235 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 NbasE9Q411 2356 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Ltbp4Q8K4G1 1666 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Ighv1-55A0A075B5W6 117 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 P01660 111 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Prr15lQ8JZM2 100 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 P01655 112 aa12.5□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Trav9d-3A0A075B695 113 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Zc2hc1aQ8BJH1 324 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 P01837 106 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Tns1E9Q0S6 1888 aaKnown RBP12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Pom121l2Q5SW25 972 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 C730034F03RikQ8BGL5 111 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Trav12-3A0A075B648 115 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Gm17472A0A075B683 117 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Igkv1-88A0A140T8N1 120 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Tmem263Q9DAM7 115 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Gm6034E9Q101 117 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Wdr90Q6ZPG2 1874 aa12.49□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Lst1O08843 95 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Smim10l1A0A087WNQ7 89 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 P0C1Z5 52 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Gm10295Q8CCF3 114 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Cox7a1P56392 80 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 NpbQ8K4P1 119 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Trav6n-6A0A075B6B2 114 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Trav14-1A0A0G2JF94 121 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 March3Q8BRX9 218 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Foxi2Q3I5G5 311 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Gm11733Q8BQP1 125 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Spag11Q8K4N2 71 aa12.48□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Trav7-6A0A075B640 112 aa12.47□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Rpl18aP62717 176 aaKnown RBP12.47□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Slc25a29Q8BL03 306 aa12.47□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Pkd1l2Q7TN88 2461 aa12.47□□□□□ -0.41
Ubr3-201ENSMUST00000055758 4930447F04RikA2AFR2 126 aa12.47□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Fam110dQ80X91 271 aa12.46□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Zc2hc1bQ9D534 172 aa12.46□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Ighv1-39A0A075B5V5 117 aa12.46□□□□□ -0.41
Ubr3-201ENSMUST00000055758 Csrp2P97314 193 aaKnown RBP12.46□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Trav11A0A0B4J1J9 114 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Ighv13-2A0A0A6YWN3 119 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Ighv8-12A0A0G2JDE1 119 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 ColqO35348 457 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Tmem30bQ8BHG3 353 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Igkv2-109A0A075B5K6 120 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Klk12B2RVZ0 247 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Defb26Q30KN7 186 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Klk9Q32M27 251 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 OtosQ8R448 89 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Pcsk5Q04592 1877 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Dpm3Q9D1Q4 92 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 1700012A03RikQ9DAF1 130 aa12.45□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Igkv5-37A0A140T8N4 115 aa12.44□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Ube2aQ9Z255 152 aa12.44□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Glrp1E9Q9S8 174 aa12.44□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Q8C708 225 aa12.44□□□□□ -0.42
Ubr3-201ENSMUST00000055758 Ighv3-1A0A075B5S6 116 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms