RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 NpyP57774 97 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 BlcapP62951 87 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 TrioQ0KL02 3102 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm15294V9GXA7 121 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 MsmbO08540 113 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Cspg4Q8VHY0 2327 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv4-62A0A0G2JDW9 117 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 P01736 120 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 CnfnQ6PCW6 111 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Snx22Q8C084 192 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm20499D3Z4G5 72 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Lamtor3O88653 124 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm6793B2RXM2 351 aa6.5□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Defa27F2Z403 93 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Zcwpw2Q08EN7 125 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Tex48Q9DA81 110 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm10226O88253 85 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gpx1P11352 201 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 NrgnP60761 78 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv3-8A0A075B5T0 131 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Spink12Q9D256 87 aa6.49□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Socs3O35718 225 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Taf15Q8BQ46 557 aaKnown RBP6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ube2v1Q9CZY3 147 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ube2e2Q91W82 201 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Med12A2AGH6 2190 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv1-75A0A075B5Y2 117 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv1-82A0A0G2JEU7 117 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv1-12A0A0A6YXJ9 117 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv4-59A0A0B4J1I8 117 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv3-9A0A140T8P4 119 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm16381A0A1Y7VKT9 73 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Defb26Q30KN7 186 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Sdhaf1Q3U276 118 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 NpbQ8K4P1 119 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Cd24P24807 76 aa6.48□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Crlf1Q9JM58 425 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Cep250Q60952 2414 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv4-53A0A0G2JFC6 119 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 BC048502Q80Y74 154 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 PmvkQ9D1G2 192 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Arhgef17Q80U35 2057 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm29423A0A087WRM1 55 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv4-68A0A0B4J1I7 117 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Wipf1Q8K1I7 493 aa6.47□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 UrahQ9CRB3 118 aa6.46□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm29289A0A087WPY7 166 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Tcl1b4P56844 120 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav7d-3Q5R1I1 112 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ndufb4Q9CQC7 129 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav14d-3-dv8A0A075B619 120 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trbv14A0A140T8L9 115 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav3-1Q5R1I8 114 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 March3Q8BRX9 218 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ly6g5bQ8K1T4 194 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Plac1Q9JI83 173 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm4064A0A087WR82 380 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm10352B2RWR6 380 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm21693J3QK27 380 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Rbmy1a1O35698 380 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm10767Q3TQP0 103 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 MrapQ9D159 127 aa6.46□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm7102J3QQ10 178 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Rpl32-psP17932 135 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Dad1P61804 113 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ighv12-3A0A075B5T1 117 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ighv8-4A0A0A6YW26 117 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv8-34A0A0G2JDU0 121 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 1500011B03RikQ3TTH7 73 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trbv16A0A0B4J1H3 115 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ly86O88188 162 aa6.45□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ighv8-8A0A0A6YXQ0 119 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv4-61A0A0G2JH00 117 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ccl21aP84444 133 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ccl21bP86792 133 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ccl21cP86793 133 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Tal2Q62282 108 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Znf580Q9DB38 172 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Sptbn1Q62261 2363 aaKnown RBP6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Smim26Q3V460 107 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Olfr312Q7TRZ9 308 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm9913Q8BQQ2 135 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Synj2bpQ9D6K5 145 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 PpbpQ9EQI5 113 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav8-1A0A075B641 109 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 P0C913 63 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Prr9Q8BV84 116 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Q9D131 166 aa6.44□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Mki67E9PVX6 3177 aaKnown RBP6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm21370Q3T9V6 190 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Crip3Q6Q6R3 243 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Rnf185Q91YT2 192 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Sptan1P16546 2472 aaKnown RBP6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Mrps12O35680 139 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Olfr311Q5NC59 308 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ifitm1Q9D103 106 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Fam216aQ9DB54 251 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm10553J3QPF1 123 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Cox17P56394 63 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Fam110dQ80X91 271 aa6.43□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms