RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W EFT1P32324 842 aaKnown RBP2.44□□□□□ -2.02
NUP100YKL068W LOT5P34234 306 aa2.44□□□□□ -2.02
NUP100YKL068W SAP190P36123 1033 aa2.44□□□□□ -2.02
NUP100YKL068W MRPL16P38064 232 aa2.44□□□□□ -2.02
NUP100YKL068W OSH7P38755 437 aa2.44□□□□□ -2.02
NUP100YKL068W YEL076CP39971 216 aa2.44□□□□□ -2.02
NUP100YKL068W NPP2P39997 493 aa2.44□□□□□ -2.02
NUP100YKL068W YJR061WP40355 935 aa2.44□□□□□ -2.02
NUP100YKL068W YFL052WP43551 465 aa2.44□□□□□ -2.02
NUP100YKL068W YGR266WP53326 701 aa2.44□□□□□ -2.02
NUP100YKL068W OGG1P53397 376 aaPredicted RBP2.44□□□□□ -2.02
NUP100YKL068W NCE103P53615 221 aa2.44□□□□□ -2.02
NUP100YKL068W SPH1Q06160 661 aa2.44□□□□□ -2.02
NUP100YKL068W YLH47Q06493 454 aa2.44□□□□□ -2.02
NUP100YKL068W MDY2Q12285 212 aa2.44□□□□□ -2.02
NUP100YKL068W NSI1Q12457 570 aa2.44□□□□□ -2.02
NUP100YKL068W YOR111WQ99210 232 aa2.44□□□□□ -2.02
NUP100YKL068W DIF1O13577 133 aa2.43□□□□□ -2.02
NUP100YKL068W SWI6P09959 803 aa2.43□□□□□ -2.02
NUP100YKL068W LAT1P12695 482 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W DGR2P32330 852 aa2.43□□□□□ -2.02
NUP100YKL068W SRO77P38163 1010 aa2.43□□□□□ -2.02
NUP100YKL068W PIK1P39104 1066 aa2.43□□□□□ -2.02
NUP100YKL068W BUD16P39988 312 aa2.43□□□□□ -2.02
NUP100YKL068W STU2P46675 888 aa2.43□□□□□ -2.02
NUP100YKL068W AIP1P46680 615 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W PUS4P48567 403 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W SHE10P53075 577 aa2.43□□□□□ -2.02
NUP100YKL068W NOP15P53927 220 aaPredicted RBP2.43□□□□□ -2.02
NUP100YKL068W VPS9P54787 451 aa2.43□□□□□ -2.02
NUP100YKL068W YSA1Q01976 231 aa2.43□□□□□ -2.02
NUP100YKL068W NGL3Q03210 505 aa2.43□□□□□ -2.02
NUP100YKL068W RKM2Q03942 479 aa2.43□□□□□ -2.02
NUP100YKL068W IWR1Q07532 353 aaPredicted RBP2.43□□□□□ -2.02
NUP100YKL068W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
NUP100YKL068W PML1Q07930 204 aaPredicted RBP2.43□□□□□ -2.02
NUP100YKL068W COX17Q12287 69 aa2.43□□□□□ -2.02
NUP100YKL068W YBR182C-AQ8TGU6 64 aa2.43□□□□□ -2.02
NUP100YKL068W YLR358CO13565 187 aa2.43□□□□□ -2.02
NUP100YKL068W SEC53P07283 254 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W STE12P13574 688 aa2.43□□□□□ -2.02
NUP100YKL068W RIT1P23796 513 aa2.43□□□□□ -2.02
NUP100YKL068W CLB1P24868 471 aa2.43□□□□□ -2.02
NUP100YKL068W VPS17P32913 551 aa2.43□□□□□ -2.02
NUP100YKL068W MDL2P33311 773 aa2.43□□□□□ -2.02
NUP100YKL068W NIP100P33420 868 aa2.43□□□□□ -2.02
NUP100YKL068W SRP68P38687 599 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W YHR097CP38809 366 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W NAS2P40555 220 aa2.43□□□□□ -2.02
NUP100YKL068W SSU1P41930 458 aa2.43□□□□□ -2.02
NUP100YKL068W CCT7P42943 550 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W PSP1P50896 841 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W FOL2P51601 243 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W HST3P53687 447 aa2.43□□□□□ -2.02
NUP100YKL068W TOF1P53840 1238 aa2.43□□□□□ -2.02
NUP100YKL068W SFB2P53953 876 aa2.43□□□□□ -2.02
NUP100YKL068W ERV25P54837 211 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W ARP4P80428 489 aa2.43□□□□□ -2.02
NUP100YKL068W MCP2Q06567 569 aa2.43□□□□□ -2.02
NUP100YKL068W ENT4Q07872 247 aa2.43□□□□□ -2.02
NUP100YKL068W MLH2Q07980 695 aa2.43□□□□□ -2.02
NUP100YKL068W CLP1Q08685 445 aaPredicted RBP2.43□□□□□ -2.02
NUP100YKL068W ALG6Q12001 544 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W TY1A-BLQ12266 440 aa2.43□□□□□ -2.02
NUP100YKL068W ZRT2Q12436 422 aa2.43□□□□□ -2.02
NUP100YKL068W YBR126W-AQ8TGU7 68 aa2.43□□□□□ -2.02
NUP100YKL068W YLR149CQ99296 730 aa2.43□□□□□ -2.02
NUP100YKL068W OM45P16547 393 aa2.43□□□□□ -2.02
NUP100YKL068W PRP22P24384 1145 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W PTP1P25044 335 aa2.43□□□□□ -2.02
NUP100YKL068W SYN8P31377 255 aa2.43□□□□□ -2.02
NUP100YKL068W PUP2P32379 260 aa2.43□□□□□ -2.02
NUP100YKL068W SAC6P32599 642 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W GYP6P32806 458 aa2.43□□□□□ -2.02
NUP100YKL068W MIC60P36112 540 aa2.43□□□□□ -2.02
NUP100YKL068W ARL1P38116 183 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W TIF5P38431 405 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W ATF1P40353 525 aa2.43□□□□□ -2.02
NUP100YKL068W PRK1P40494 810 aa2.43□□□□□ -2.02
NUP100YKL068W NEO1P40527 1151 aa2.43□□□□□ -2.02
NUP100YKL068W PRM2P40534 656 aa2.43□□□□□ -2.02
NUP100YKL068W THI6P41835 540 aa2.43□□□□□ -2.02
NUP100YKL068W FET5P43561 622 aa2.43□□□□□ -2.02
NUP100YKL068W HFM1P51979 1187 aa2.43□□□□□ -2.02
NUP100YKL068W ALT1P52893 592 aa2.43□□□□□ -2.02
NUP100YKL068W LSC2P53312 427 aa2.43□□□□□ -2.02
NUP100YKL068W FDC1Q03034 503 aa2.43□□□□□ -2.02
NUP100YKL068W HAS1Q03532 505 aaKnown RBP2.43□□□□□ -2.02
NUP100YKL068W YLR407WQ06070 228 aa2.43□□□□□ -2.02
NUP100YKL068W FMP45Q07651 309 aa2.43□□□□□ -2.02
NUP100YKL068W TGL5Q12043 749 aa2.43□□□□□ -2.02
NUP100YKL068W TY3A-GQ12173 290 aa2.43□□□□□ -2.02
NUP100YKL068W GPM3Q12326 303 aa2.43□□□□□ -2.02
NUP100YKL068W TY3A-IQ99219 290 aa2.43□□□□□ -2.02
NUP100YKL068W SIR1P21691 654 aa2.42□□□□□ -2.02
NUP100YKL068W GRR1P24814 1151 aa2.42□□□□□ -2.02
NUP100YKL068W SLA2P33338 968 aa2.42□□□□□ -2.02
NUP100YKL068W UIP5P36137 443 aa2.42□□□□□ -2.02
NUP100YKL068W MRPL36P36531 177 aa2.42□□□□□ -2.02
NUP100YKL068W MUP3P38734 546 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms