RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W PSD1P39006 500 aa5.02□□□□□ -1.61
YJR028WYJR028W NMA2P53204 395 aa5.02□□□□□ -1.61
YJR028WYJR028W DIP5P53388 608 aa5.02□□□□□ -1.61
YJR028WYJR028W SMX3P54999 86 aaPredicted RBP5.02□□□□□ -1.61
YJR028WYJR028W TY2A-DR2Q03483 438 aa5.02□□□□□ -1.61
YJR028WYJR028W TY2A-BQ12260 438 aa5.02□□□□□ -1.61
YJR028WYJR028W TY2A-OR2Q12293 438 aa5.02□□□□□ -1.61
YJR028WYJR028W TY2A-DR1Q12392 438 aa5.02□□□□□ -1.61
YJR028WYJR028W TY2A-OR1Q12439 438 aa5.02□□□□□ -1.61
YJR028WYJR028W RVB2Q12464 471 aaKnown RBP5.02□□□□□ -1.61
YJR028WYJR028W TY2A-DR3Q99303 438 aa5.02□□□□□ -1.61
YJR028WYJR028W RPB2P08518 1224 aaKnown RBP5.01□□□□□ -1.61
YJR028WYJR028W CNS1P33313 385 aa5.01□□□□□ -1.61
YJR028WYJR028W MFT1P33441 392 aaKnown RBP5.01□□□□□ -1.61
YJR028WYJR028W CCL1P37366 393 aa5.01□□□□□ -1.61
YJR028WYJR028W COG1P53079 417 aa5.01□□□□□ -1.61
YJR028WYJR028W YNL092WP53934 400 aa5.01□□□□□ -1.61
YJR028WYJR028W DAK1P54838 584 aaKnown RBP5.01□□□□□ -1.61
YJR028WYJR028W KIN4Q01919 800 aa5.01□□□□□ -1.61
YJR028WYJR028W TSR2Q06672 205 aaKnown RBP5.01□□□□□ -1.61
YJR028WYJR028W BMS1Q08965 1183 aaKnown RBP5.01□□□□□ -1.61
YJR028WYJR028W YBR255C-AQ3E776 120 aa5.01□□□□□ -1.61
YJR028WYJR028W RPL19AP0CX82 189 aaKnown RBP5□□□□□ -1.61
YJR028WYJR028W RPL19BP0CX83 189 aaPredicted RBP5□□□□□ -1.61
YJR028WYJR028W ESL2P36168 1195 aa5□□□□□ -1.61
YJR028WYJR028W UBP5P39944 805 aa5□□□□□ -1.61
YJR028WYJR028W NDC80P40460 691 aa5□□□□□ -1.61
YJR028WYJR028W ZAP1P47043 880 aa5□□□□□ -1.61
YJR028WYJR028W SRB7P47822 140 aa5□□□□□ -1.61
YJR028WYJR028W YIP4P53093 235 aa5□□□□□ -1.61
YJR028WYJR028W SSL2Q00578 843 aa5□□□□□ -1.61
YJR028WYJR028W MFM1Q02783 413 aa5□□□□□ -1.61
YJR028WYJR028W GSF2Q04697 403 aaKnown RBP5□□□□□ -1.61
YJR028WYJR028W RCO1Q04779 684 aa5□□□□□ -1.61
YJR028WYJR028W CRF1Q04930 467 aa5□□□□□ -1.61
YJR028WYJR028W INH1P01097 85 aa4.99□□□□□ -1.61
YJR028WYJR028W MET8P15807 274 aa4.99□□□□□ -1.61
YJR028WYJR028W MRP20P32387 263 aa4.99□□□□□ -1.61
YJR028WYJR028W APL3P38065 1025 aa4.99□□□□□ -1.61
YJR028WYJR028W ARO9P38840 513 aaPredicted RBP4.99□□□□□ -1.61
YJR028WYJR028W ARG2P40360 574 aa4.99□□□□□ -1.61
YJR028WYJR028W BUD17P53727 317 aa4.99□□□□□ -1.61
YJR028WYJR028W YNR061CP53747 219 aa4.99□□□□□ -1.61
YJR028WYJR028W GIR2Q03768 265 aaPredicted RBP4.99□□□□□ -1.61
YJR028WYJR028W ENT1Q12518 454 aa4.99□□□□□ -1.61
YJR028WYJR028W PNO1Q99216 274 aaKnown RBP4.99□□□□□ -1.61
YJR028WYJR028W LAM4P38800 1345 aa4.99□□□□□ -1.61
YJR028WYJR028W ATP2P00830 511 aaKnown RBP4.98□□□□□ -1.61
YJR028WYJR028W YML003WP0CF16 290 aa4.98□□□□□ -1.61
YJR028WYJR028W YJL206CP39529 758 aa4.98□□□□□ -1.61
YJR028WYJR028W YJR061WP40355 935 aa4.98□□□□□ -1.61
YJR028WYJR028W IST3P40565 148 aaPredicted RBP4.98□□□□□ -1.61
YJR028WYJR028W VPS4P52917 437 aa4.98□□□□□ -1.61
YJR028WYJR028W IMO32P53219 342 aa4.98□□□□□ -1.61
YJR028WYJR028W SPC98P53540 846 aa4.98□□□□□ -1.61
YJR028WYJR028W REG1Q00816 1014 aa4.98□□□□□ -1.61
YJR028WYJR028W MTG1Q03151 367 aaPredicted RBP4.98□□□□□ -1.61
YJR028WYJR028W GTB1Q04924 702 aa4.98□□□□□ -1.61
YJR028WYJR028W STP3Q05937 343 aa4.98□□□□□ -1.61
YJR028WYJR028W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
YJR028WYJR028W PRS5Q12265 496 aaKnown RBP4.98□□□□□ -1.61
YJR028WYJR028W VCX1Q99385 411 aa4.98□□□□□ -1.61
YJR028WYJR028W KGD2P19262 463 aaPredicted RBP4.97□□□□□ -1.61
YJR028WYJR028W ERG8P24521 451 aa4.97□□□□□ -1.61
YJR028WYJR028W NFU1P32860 256 aa4.97□□□□□ -1.61
YJR028WYJR028W YHL017WP38745 532 aa4.97□□□□□ -1.61
YJR028WYJR028W PCL5P38794 229 aa4.97□□□□□ -1.61
YJR028WYJR028W ARC1P46672 376 aaKnown RBP4.97□□□□□ -1.61
YJR028WYJR028W BSC5P53755 489 aa4.97□□□□□ -1.61
YJR028WYJR028W ESC8Q08119 714 aa4.97□□□□□ -1.61
YJR028WYJR028W TMA16Q08687 178 aa4.97□□□□□ -1.61
YJR028WYJR028W Q0010Q9ZZX9 128 aa4.97□□□□□ -1.61
YJR028WYJR028W OLE1P21147 510 aaKnown RBP4.97□□□□□ -1.61
YJR028WYJR028W AMD2P22580 549 aa4.97□□□□□ -1.61
YJR028WYJR028W CMK1P27466 446 aaKnown RBP4.97□□□□□ -1.61
YJR028WYJR028W GCD7P32502 381 aaPredicted RBP4.97□□□□□ -1.61
YJR028WYJR028W TRM2P33753 639 aa4.97□□□□□ -1.61
YJR028WYJR028W NUP120P35729 1037 aa4.97□□□□□ -1.61
YJR028WYJR028W JNM1P36224 373 aa4.97□□□□□ -1.61
YJR028WYJR028W TDP1P38319 544 aa4.97□□□□□ -1.61
YJR028WYJR028W MIT1P40002 666 aa4.97□□□□□ -1.61
YJR028WYJR028W LYS14P40971 790 aa4.97□□□□□ -1.61
YJR028WYJR028W THI6P41835 540 aa4.97□□□□□ -1.61
YJR028WYJR028W CCT7P42943 550 aaKnown RBP4.97□□□□□ -1.61
YJR028WYJR028W ASE1P50275 885 aa4.97□□□□□ -1.61
YJR028WYJR028W NRD1P53617 575 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
YJR028WYJR028W YSA1Q01976 231 aa4.97□□□□□ -1.61
YJR028WYJR028W MUK1Q02866 612 aa4.97□□□□□ -1.61
YJR028WYJR028W YDR179W-AQ03983 463 aa4.97□□□□□ -1.61
YJR028WYJR028W PSK2Q08217 1101 aa4.97□□□□□ -1.61
YJR028WYJR028W YPL216WQ08964 1102 aa4.97□□□□□ -1.61
YJR028WYJR028W YLR302CO13544 120 aa4.96□□□□□ -1.62
YJR028WYJR028W TUB2P02557 457 aaKnown RBP4.96□□□□□ -1.62
YJR028WYJR028W AAC1P04710 309 aa4.96□□□□□ -1.62
YJR028WYJR028W MRP7P12687 371 aa4.96□□□□□ -1.62
YJR028WYJR028W YPK1P12688 680 aaKnown RBP4.96□□□□□ -1.62
YJR028WYJR028W SWC3P31376 625 aa4.96□□□□□ -1.62
YJR028WYJR028W GMH1P36125 273 aa4.96□□□□□ -1.62
YJR028WYJR028W CHS7P38843 316 aa4.96□□□□□ -1.62
YJR028WYJR028W AIM21P40563 679 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms