RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 MAST2Q6P0Q8 1798 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 A0A1B0GVL5 298 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 KINO60870 393 aaKnown RBP20.73■□□□□ 0.91
PHGDH-226ENST00000641756 RGS22Q8NE09 1264 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 ZSCAN10Q96SZ4 725 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-226ENST00000641756 CBX8Q9HC52 389 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 BRWD3Q6RI45 1802 aa20.73■□□□□ 0.91
PHGDH-226ENST00000641756 CYP2D6P10635 497 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 ST5P78524 1137 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 GPSM2P81274 684 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 ENAHQ8N8S7 591 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-226ENST00000641756 FANCBQ8NB91 859 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 SLC4A8Q2Y0W8 1093 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 SLC27A3Q5K4L6 730 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 NBPF11Q86T75 865 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 DNAJC25Q9H1X3 360 aa20.72■□□□□ 0.91
PHGDH-226ENST00000641756 TRIM22Q8IYM9 498 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-226ENST00000641756 NDUFA8P51970 172 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 GRIK5Q16478 980 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-226ENST00000641756 CRACR2BQ8N4Y2 399 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-226ENST00000641756 TDRD7Q8NHU6 1098 aaKnown RBP20.71■□□□□ 0.91
PHGDH-226ENST00000641756 WASF1Q92558 559 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.71■□□□□ 0.91
PHGDH-226ENST00000641756 KCNJ14Q9UNX9 436 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 ZKSCAN5Q9Y2L8 839 aa20.71■□□□□ 0.91
PHGDH-226ENST00000641756 CTAGE5O15320 804 aa20.7■□□□□ 0.9
PHGDH-226ENST00000641756 FGRP09769 529 aa20.7■□□□□ 0.9
PHGDH-226ENST00000641756 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
PHGDH-226ENST00000641756 IFIT1BQ5T764 474 aaKnown RBP20.7■□□□□ 0.9
PHGDH-226ENST00000641756 FMR1NBQ8N0W7 255 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-226ENST00000641756 ERCC4Q92889 916 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-226ENST00000641756 CCDC196A0A1B0GTZ2 297 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 LDHBP07195 334 aaKnown RBP20.69■□□□□ 0.9
PHGDH-226ENST00000641756 U2AF2P26368 475 aaKnown RBP eCLIP20.69■□□□□ 0.94e-10■■□□□ 11.5
PHGDH-226ENST00000641756 DDR1Q08345 913 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 ZNF804AQ7Z570 1209 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 WDR66Q8TBY9 1149 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 ATP8A2Q9NTI2 1148 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
PHGDH-226ENST00000641756 A0A087WWV3 80 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 UFL1O94874 794 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 RCAN1P53805 252 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 SLC39A14Q15043 492 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 FAM47AQ5JRC9 791 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 IQCA1Q86XH1 822 aa20.69■□□□□ 0.9
PHGDH-226ENST00000641756 RBM17Q96I25 401 aaKnown RBP20.69■□□□□ 0.9
PHGDH-226ENST00000641756 LAMB1P07942 1786 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 WDHD1O75717 1129 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-226ENST00000641756 DEXIO95424 95 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 ZNF165P49910 485 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 DIXDC1Q155Q3 683 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 NMT2O60551 498 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 MMP1P03956 469 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 AXDND1Q5T1B0 1012 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-226ENST00000641756 PROM2Q8N271 834 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 MCM9Q9NXL9 1143 aa20.68■□□□□ 0.9
PHGDH-226ENST00000641756 ARPP21Q9UBL0 812 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-226ENST00000641756 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
PHGDH-226ENST00000641756 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
PHGDH-226ENST00000641756 TXNRD1Q16881 649 aa20.67■□□□□ 0.9
PHGDH-226ENST00000641756 C11orf57Q6ZUT1 292 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-226ENST00000641756 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
PHGDH-226ENST00000641756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.67■□□□□ 0.92e-6■■■■■ 31.1
PHGDH-226ENST00000641756 MROH7-TTC4A0A0A0MT08 1334 aa20.67■□□□□ 0.9
PHGDH-226ENST00000641756 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
PHGDH-226ENST00000641756 PTPAQ15257 358 aa20.66■□□□□ 0.9
PHGDH-226ENST00000641756 DIS3L2Q8IYB7 885 aaKnown RBP20.66■□□□□ 0.9
PHGDH-226ENST00000641756 SH3RF3Q8TEJ3 882 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-226ENST00000641756 ZNF830Q96NB3 372 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-226ENST00000641756 MAP3K14Q99558 947 aa20.66■□□□□ 0.9
PHGDH-226ENST00000641756 POLRMTO00411 1230 aaKnown RBP20.66■□□□□ 0.9
PHGDH-226ENST00000641756 ORC4O43929 436 aa20.66■□□□□ 0.9
PHGDH-226ENST00000641756 SAFBQ15424 915 aaKnown RBP eCLIP20.66■□□□□ 0.9
PHGDH-226ENST00000641756 SDF4Q9BRK5 362 aa20.66■□□□□ 0.9
PHGDH-226ENST00000641756 GGA1Q9UJY5 639 aa20.66■□□□□ 0.9
PHGDH-226ENST00000641756 hCG_1642624A0A1W2PR95 340 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 ZBTB22O15209 634 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 PLEKHA8P1O95397 391 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 USP5P45974 858 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 STX1AQ16623 288 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 SBK1Q52WX2 424 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 NOSTRINQ8IVI9 506 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 CD209Q9NNX6 404 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
PHGDH-226ENST00000641756 PFKFB1P16118 471 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 ATP2B4P23634 1241 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 C15orf52Q6ZUT6 534 aaKnown RBP20.65■□□□□ 0.9
PHGDH-226ENST00000641756 FBXW7Q969H0 707 aa20.65■□□□□ 0.9
PHGDH-226ENST00000641756 DLEC1Q9Y238 1755 aa20.64■□□□□ 0.9
PHGDH-226ENST00000641756 MYH6P13533 1939 aa20.64■□□□□ 0.89
PHGDH-226ENST00000641756 TROAPQ12815 778 aa20.64■□□□□ 0.89
PHGDH-226ENST00000641756 TMED8Q6PL24 325 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-226ENST00000641756 RNF26Q9BY78 433 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms