RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FBXO18Q8NFZ0 1043 aa20.16■□□□□ 0.82
PHGDH-208ENST00000641023 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
PHGDH-208ENST00000641023 MYL10Q9BUA6 226 aa20.16■□□□□ 0.82
PHGDH-208ENST00000641023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
PHGDH-208ENST00000641023 IARSP41252 1262 aaKnown RBP20.15■□□□□ 0.82
PHGDH-208ENST00000641023 BTDP43251 543 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 PPP2R5BQ15173 497 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 SPATA32Q96LK8 384 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 NID2Q14112 1375 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 SEC23AQ15436 765 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 NTRK3Q16288 839 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 C12orf60Q5U649 245 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 ATL3Q6DD88 541 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 TTC6Q86TZ1 520 aa20.15■□□□□ 0.82
PHGDH-208ENST00000641023 TFIP11Q9UBB9 837 aaKnown RBP20.15■□□□□ 0.82
PHGDH-208ENST00000641023 USP17L8P0C7I0 530 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 GUCY1B3Q02153 619 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 TGFBRAP1Q8WUH2 860 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-208ENST00000641023 RTN1Q16799 776 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 IFIT1BQ5T764 474 aaKnown RBP20.14■□□□□ 0.81
PHGDH-208ENST00000641023 GAS2L3Q86XJ1 694 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 ZNF654Q8IZM8 581 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 ENAHQ8N8S7 591 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-208ENST00000641023 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
PHGDH-208ENST00000641023 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 CYP2D6P10635 497 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 IFNAR1P17181 557 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 PODNQ7Z5L7 613 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 FANCBQ8NB91 859 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 FBXW7Q969H0 707 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 GAKO14976 1311 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 MYH2Q9UKX2 1941 aa20.13■□□□□ 0.81
PHGDH-208ENST00000641023 GOLGA6L4A6NEF3 574 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 SSRP1Q08945 709 aaKnown RBP20.12■□□□□ 0.81
PHGDH-208ENST00000641023 DOK7Q18PE1 504 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 NUP133Q8WUM0 1156 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 LEO1Q8WVC0 666 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-208ENST00000641023 PHKBQ93100 1093 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 ZNF396Q96N95 335 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-208ENST00000641023 ALG1Q9BT22 464 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 STK36Q9NRP7 1315 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 CHRNA5P30532 468 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 DEFB132Q7Z7B7 95 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 CATIPQ7Z7H3 387 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 WASF1Q92558 559 aa20.12■□□□□ 0.81
PHGDH-208ENST00000641023 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-208ENST00000641023 XRCC6P12956 609 aaKnown RBP eCLIP20.11■□□□□ 0.815e-6■■□□□ 11.5
PHGDH-208ENST00000641023 TPRNQ4KMQ1 711 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 TEX11Q8IYF3 940 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 LAMB1P07942 1786 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 SYCE3A1L190 88 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 FMNL1O95466 1100 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-208ENST00000641023 CALM1P0DP23 149 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 CALM2P0DP24 149 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 CALM3P0DP25 149 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 EVX2Q03828 476 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 MAPKAPK5Q8IW41 473 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
PHGDH-208ENST00000641023 TRIM29Q14134 588 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 OTUD7BQ6GQQ9 843 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 LRSAM1Q6UWE0 723 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 BRAPQ7Z569 592 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 SLC26A6Q9BXS9 759 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 MKNK2Q9HBH9 465 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
PHGDH-208ENST00000641023 LETM1O95202 739 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-208ENST00000641023 RHBDL3P58872 404 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 SLC4A8Q2Y0W8 1093 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 CCDC183Q5T5S1 534 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 CC2D2BQ6DHV5 1058 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
PHGDH-208ENST00000641023 FAM47AQ5JRC9 791 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 SLC16A10Q8TF71 515 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
PHGDH-208ENST00000641023 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
PHGDH-208ENST00000641023 F8W031 263 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 DDAH1O94760 285 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 CCDC178Q5BJE1 867 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 CRACR2BQ8N4Y2 399 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 CERS5Q8N5B7 392 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 DBNDD1Q9H9R9 158 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 GJB4Q9NTQ9 266 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 FLT1P17948 1338 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 DEXIO95424 95 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 PLCD1P51178 756 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 TFAP4Q01664 338 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 CEBPZQ03701 1054 aaKnown RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 TROAPQ12815 778 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 KRT40Q6A162 431 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 ILDR1Q86SU0 546 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 C7orf43Q8WVR3 580 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 DYNLL2Q96FJ2 89 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 USP28Q96RU2 1077 aa20.07■□□□□ 0.8
PHGDH-208ENST00000641023 PDGFDQ9GZP0 370 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-208ENST00000641023 RCOR1Q9UKL0 485 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms