RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 NAP1L3Q99457 506 aaPredicted RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 VPS33BQ9H267 617 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 SYNCQ9H7C4 482 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 CAPN7Q9Y6W3 813 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 TBKBP1A7MCY6 615 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 LBRQ14739 615 aaKnown RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 ANO1Q5XXA6 986 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 ZNF75CPQ92670 426 aaPredicted RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 IRX2Q9BZI1 471 aaPredicted RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 TPCN1Q9ULQ1 816 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 SPO11Q9Y5K1 396 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 MYBBP1AQ9BQG0 1328 aaKnown RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 CPLX1O14810 134 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 SEC31AO94979 1220 aaKnown RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 CAVIN2O95810 425 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 ARPC4P59998 168 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 KSR2Q6VAB6 950 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 CCAR2Q8N163 923 aaKnown RBP6.91□□□□□ -1.3
NECAP1-222ENST00000640072 LRRC43Q8N309 656 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 PLEKHA4Q9H4M7 779 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 MCM8Q9UJA3 840 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 DAAM1Q9Y4D1 1078 aa6.91□□□□□ -1.3
NECAP1-222ENST00000640072 SLC4A1P02730 911 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 VIL1P09327 827 aaKnown RBP6.9□□□□□ -1.3
NECAP1-222ENST00000640072 PDGFRBP09619 1106 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 SRGNP10124 158 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 GPTP24298 496 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 NEK2P51955 445 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 LRRC41Q15345 812 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 CEP85LQ5SZL2 805 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 MAATS1Q7Z4T9 603 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 GLMNQ92990 594 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 NELL2Q99435 816 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 KCNF1Q9H3M0 494 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 HELLSQ9NRZ9 838 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 TSKSQ9UJT2 592 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
NECAP1-222ENST00000640072 EIF3AQ14152 1382 aaKnown RBP6.9□□□□□ -1.3
NECAP1-222ENST00000640072 CUX2O14529 1486 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 FOXD2O60548 495 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 STAM2O75886 525 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 SCG2P13521 617 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 H2AFXP16104 143 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 TUFMP49411 452 aaKnown RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 LRMPQ12912 555 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 CNGA3Q16281 694 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 GRAMD1BQ3KR37 738 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 Q4G0T1 1027 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 PLEKHO1Q53GL0 409 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 SH2D4BQ5SQS7 431 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 C14orf80Q86SX3 495 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 KIRREL3Q8IZU9 778 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 CAPN10Q9HC96 672 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 A1CFQ9NQ94 594 aaKnown RBP6.9□□□□□ -1.31
NECAP1-222ENST00000640072 MYOM3Q5VTT5 1437 aa6.9□□□□□ -1.31
NECAP1-222ENST00000640072 NCOA2Q15596 1464 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 TRIM64A6NGJ6 449 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 TRIM64BA6NI03 449 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 DNAJC6O75061 913 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 DESP17661 470 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 MARSP56192 900 aaKnown RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 HDAC4P56524 1084 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 LILRB1Q8NHL6 650 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ERMNQ8TAM6 284 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ARHGEF2Q92974 986 aaKnown RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 HVCN1Q96D96 273 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 RABEP2Q9H5N1 569 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 DNAI1Q9UI46 699 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 FBXO2Q9UK22 296 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 MAPK8IP1Q9UQF2 711 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 RRBP1Q9P2E9 1410 aaKnown RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 MYCP01106 439 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 GLULP15104 373 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 CENPAP49450 140 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 SLC30A9Q6PML9 568 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ATF7IPQ6VMQ6 1270 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 CEP112Q8N8E3 955 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 APPBP2Q92624 585 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 AP1M1Q9BXS5 423 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 BICC1Q9H694 974 aaKnown RBP6.89□□□□□ -1.31
NECAP1-222ENST00000640072 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 RGL1Q9NZL6 768 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ZMYM3Q14202 1370 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 H0YC42 278 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 STK25O00506 426 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ERC2O15083 957 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 ORC4O43929 436 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 IL33O95760 270 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 COL6A1P12109 1028 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 RAB27AP51159 221 aa6.89□□□□□ -1.31
NECAP1-222ENST00000640072 INAQ16352 499 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms