RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 ZNHIT6Q9NWK9 470 aaKnown RBP6.4□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC189A1A4V9 331 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 ZBTB43O43298 467 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 DSCC1Q9BVC3 393 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 SAMM50Q9Y512 469 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 BMP15O95972 392 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 CYP2E1P05181 493 aaPredicted RBP6.4□□□□□ -1.39
SCARB2-218ENST00000639715 PTH1RQ03431 593 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 MTX1Q13505 466 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 FAM114A1Q8IWE2 563 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 RNF168Q8IYW5 571 aaPredicted RBP6.4□□□□□ -1.39
SCARB2-218ENST00000639715 CD248Q9HCU0 757 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 BAIAP2L1Q9UHR4 511 aa6.4□□□□□ -1.39
SCARB2-218ENST00000639715 CAVIN4Q5BKX8 364 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MFSD6Q6ZSS7 791 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ARMC9Q7Z3E5 817 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 TMEM87AQ8NBN3 555 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ALG1Q9BT22 464 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 INCENPQ9NQS7 918 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ADGRL3Q9HAR2 1447 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CDC42BPGQ6DT37 1551 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC151A5D8V7 595 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 KCNQ3O43525 872 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 PPP1R12BO60237 982 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-218ENST00000639715 KIF5CO60282 957 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 SMIM24O75264 130 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MYBL2P10244 700 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 SLC8A1P32418 973 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ABCD1P33897 745 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MYOM1P52179 1685 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CHMP4BP1P59074 171 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 HHATQ5VTY9 493 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 RASEFQ8IZ41 740 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 STAG1Q8WVM7 1258 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-218ENST00000639715 UTP14AQ9BVJ6 771 aaKnown RBP6.39□□□□□ -1.39
SCARB2-218ENST00000639715 PCDH11XQ9BZA7 1347 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 PCDH11YQ9BZA8 1340 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 PRDM16Q9HAZ2 1276 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 RIPOR2Q9Y4F9 1068 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 COL3A1P02461 1466 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-218ENST00000639715 GOLGA6CA6NDK9 693 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 SLC34A2O95436 690 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 GOLGA6DP0CG33 693 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MSL1Q68DK7 614 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 TRIM74Q86UV6 250 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 TRIM73Q86UV7 250 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 PI4K2BQ8TCG2 481 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MIPOL1Q8TD10 442 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 RABGGTAQ92696 567 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ORAI2Q96SN7 254 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 GOLGA6AQ9NYA3 693 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ABCF2Q9UG63 623 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 ADGRB2O60241 1585 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CTAGE15A4D2H0 777 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 BIN1O00499 593 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CTAGE8P0CG41 777 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 IL2RBP14784 551 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 GNAT2P19087 354 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 KIF5BP33176 963 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 SLC9C2Q5TAH2 1124 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CTAGE6Q86UF2 777 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 MICU3Q86XE3 530 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CTAGE4Q8IX94 777 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC148Q8NFR7 591 aa6.39□□□□□ -1.39
SCARB2-218ENST00000639715 UPF1Q92900 1129 aaKnown RBP eCLIP6.39□□□□□ -1.396e-7■■■□□ 18.3
SCARB2-218ENST00000639715 MROH1Q8NDA8 1641 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 NCAPD2Q15021 1401 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 DCAF8L1A6NGE4 600 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 EXOC5O00471 708 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 GPTP24298 496 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 MCM3P25205 808 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 GNPTABQ3T906 1256 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CDC37L1Q7L3B6 337 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CATIPQ7Z7H3 387 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 AOPEPQ8N6M6 819 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 IQUBQ8NA54 791 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 TBC1D31Q96DN5 1066 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 PPP1R13BQ96KQ4 1090 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CRB1P82279 1406 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 MINDY4BA8MYZ0 360 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 TBC1D8O95759 1140 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC144BQ3MJ40 725 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC144CPQ8IYA2 1237 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC26Q8TAB7 109 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 APPBP2Q92624 585 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 ZNF274Q96GC6 653 aaPredicted RBP6.38□□□□□ -1.39
SCARB2-218ENST00000639715 CDC5LQ99459 802 aaKnown RBP6.38□□□□□ -1.39
SCARB2-218ENST00000639715 ZNF287Q9HBT7 754 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 GPR108Q9NPR9 543 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 TPCN1Q9ULQ1 816 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 A0A0D9SFI3 127 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 UBASH3AP57075 661 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 TIMM10P62072 90 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 GNGT1P63211 74 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 LRRC31Q6UY01 552 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms