RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 ZNF654Q8IZM8 581 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 BPIFA3Q9BQP9 254 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 TRIM5Q9C035 493 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 NAT10Q9H0A0 1025 aaKnown RBP9.96□□□□□ -0.82
NECAP1-218ENST00000639595 FOXP1Q9H334 677 aaPredicted RBP9.96□□□□□ -0.82
NECAP1-218ENST00000639595 SPATA31A6Q5VVP1 1343 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 GOLGA6L19H0YKK7 550 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 DEXIO95424 95 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 NOSTRINQ8IVI9 506 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 MRFAP1L1Q96HT8 127 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 USP21Q9UK80 565 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 CACNA1SQ13698 1873 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 MINDY4BA8MYZ0 360 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 UBE2Q2LH0YL09 131 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 PFKFB1P16118 471 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 KLRK1P26718 216 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 GUCY1A2P33402 732 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 DYNLL1P63167 89 aaKnown RBP9.95□□□□□ -0.82
NECAP1-218ENST00000639595 MECOMQ03112 1051 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 CTR9Q6PD62 1173 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 AMIGO3Q86WK7 504 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-218ENST00000639595 SPC24Q8NBT2 197 aa9.95□□□□□ -0.82
NECAP1-218ENST00000639595 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-218ENST00000639595 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 CUTAO60888 179 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 SLC3A2P08195 630 aaKnown RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 MARCKSP29966 332 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 FUT2Q10981 343 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 GNL2Q13823 731 aaKnown RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 SAFBQ15424 915 aaKnown RBP eCLIP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 RESP18Q5W5W9 173 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 SHC4Q6S5L8 630 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 ENAHQ8N8S7 591 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 TNKSO95271 1327 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 THSD7AQ9UPZ6 1657 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 BTBD18B2RXH4 712 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 ORC4O43929 436 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 ATP8A2Q9NTI2 1148 aa9.94□□□□□ -0.82
NECAP1-218ENST00000639595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
NECAP1-218ENST00000639595 MROH7-TTC4A0A0A0MT08 1334 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 BECN2A8MW95 431 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 SMIM22K7EJ46 135 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 PTGS1P23219 599 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 NT5C2P49902 561 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 TOB1P50616 345 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-218ENST00000639595 SBK1Q52WX2 424 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 RILPL1Q5EBL4 403 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 CCDC186Q7Z3E2 898 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 DIS3L2Q8IYB7 885 aaKnown RBP9.93□□□□□ -0.82
NECAP1-218ENST00000639595 DCP1AQ9NPI6 582 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-218ENST00000639595 TUBE1Q9UJT0 475 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 A0A1B0GUL6 1792 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 USP17L21D6R901 530 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 SYKP43405 635 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 NLRP12P59046 1061 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 TROAPQ12815 778 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 IQCA1Q86XH1 822 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 CRNKL1Q9BZJ0 848 aaKnown RBP9.93□□□□□ -0.82
NECAP1-218ENST00000639595 TFCP2L1Q9NZI6 479 aa9.93□□□□□ -0.82
NECAP1-218ENST00000639595 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CALM1P0DP23 149 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CALM2P0DP24 149 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CALM3P0DP25 149 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 C15orf52Q6ZUT6 534 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 TXNRD3Q86VQ6 643 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 ERCC4Q92889 916 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 GJD4Q96KN9 370 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 RBM28Q9NW13 759 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CLIP2Q9UDT6 1046 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 LEMD3Q9Y2U8 911 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 NHSQ6T4R5 1651 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 CYP2D7A0A087X1C5 515 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 PTPREP23469 700 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 RFC4P35249 363 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 PKN1Q16512 942 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 DPCR1Q3MIW9 517 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 IFIT1BQ5T764 474 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 STK11IPQ8N1F8 1099 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
NECAP1-218ENST00000639595 NUP133Q8WUM0 1156 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 NRBP1Q9UHY1 535 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 KCNJ14Q9UNX9 436 aa9.92□□□□□ -0.82
NECAP1-218ENST00000639595 BTAF1O14981 1849 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms