RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 ZNF652Q9Y2D9 606 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-216ENST00000639167 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-216ENST00000639167 CCZ1BP86790 482 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 CCZ1P86791 482 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-216ENST00000639167 GRIN1Q05586 938 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 NR5A1Q13285 461 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 LINC00116Q8NCU8 138 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 WASF1Q92558 559 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 BPIFA3Q9BQP9 254 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-216ENST00000639167 COL1A1P02452 1464 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-216ENST00000639167 TAF1P21675 1872 aa12.23□□□□□ -0.45
NECAP1-216ENST00000639167 SPATA31A5Q5VU36 1347 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 SPATA31A7Q8IWB4 1347 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 CUTAO60888 179 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 ZNF592Q92610 1267 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 CELF1Q92879 486 aaKnown RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 TNKSO95271 1327 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 FOXN1O15353 648 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 NEMFO60524 1076 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 PRDM1O75626 825 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 GTF2E1P29083 439 aaPredicted RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 TRMT1Q9NXH9 659 aaKnown RBP12.22□□□□□ -0.45
NECAP1-216ENST00000639167 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
NECAP1-216ENST00000639167 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 DEXIO95424 95 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 ATP1A3P13637 1013 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 KLRK1P26718 216 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 TPM4P67936 248 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 KRBA2Q6ZNG9 492 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.45
NECAP1-216ENST00000639167 CNNM3Q8NE01 707 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
NECAP1-216ENST00000639167 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.21□□□□□ -0.45
NECAP1-216ENST00000639167 KCNH3Q9ULD8 1083 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 NRAPQ86VF7 1730 aa12.21□□□□□ -0.45
NECAP1-216ENST00000639167 NID2Q14112 1375 aa12.21□□□□□ -0.46
NECAP1-216ENST00000639167 RREB1Q92766 1687 aa12.21□□□□□ -0.46
NECAP1-216ENST00000639167 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.46
NECAP1-216ENST00000639167 FAM237AA0A1B0GTK4 181 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 EVX2Q03828 476 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 SEC23AQ15436 765 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 GLIPR1L2Q4G1C9 344 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 ESR2Q92731 530 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 FAM84BQ96KN1 310 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 FANCCQ00597 558 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 TBC1D9BQ66K14 1250 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 MTERF4Q7Z6M4 381 aaKnown RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-216ENST00000639167 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 LAMB2P55268 1798 aa12.2□□□□□ -0.46
NECAP1-216ENST00000639167 CCDC196A0A1B0GTZ2 297 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 GSDMDP57764 484 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 ENAHQ8N8S7 591 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 DPF2Q92785 391 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 FOXP1Q9H334 677 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 IGSF3O75054 1194 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 ARMCX5Q6P1M9 558 aa12.19□□□□□ -0.46
NECAP1-216ENST00000639167 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-216ENST00000639167 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms