RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 SPATC1Q76KD6 591 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 GPKOWQ92917 476 aaPredicted RBP eCLIP9.5□□□□□ -0.89
SCARB2-209ENST00000638409 PTCH2Q9Y6C5 1203 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 ZAP70P43403 619 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 DDR2Q16832 855 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 MAPK8IP1Q9UQF2 711 aa9.5□□□□□ -0.89
SCARB2-209ENST00000638409 RGS20O76081 388 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 ST13P50502 369 aaKnown RBP9.49□□□□□ -0.89
SCARB2-209ENST00000638409 A0A0G2JS52 829 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 C2orf27AQ580R0 203 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 MARCH10Q8NA82 808 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-209ENST00000638409 GPR152Q8TDT2 470 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-209ENST00000638409 SHDQ96IW2 340 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 CCDC113Q9H0I3 377 aa9.49□□□□□ -0.89
SCARB2-209ENST00000638409 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
SCARB2-209ENST00000638409 EIF4A3P38919 411 aaKnown RBP9.48□□□□□ -0.89
SCARB2-209ENST00000638409 NFKB2Q00653 900 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 FAM160A1Q05DH4 1040 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 SH3PXD2AQ5TCZ1 1133 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 FBXL19Q6PCT2 694 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 NPHP1O15259 732 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 FAM8A1Q9UBU6 413 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 SBF2Q86WG5 1849 aa9.48□□□□□ -0.89
SCARB2-209ENST00000638409 AKAP10O43572 662 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 STAT3P40763 770 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 GDF10P55107 478 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-209ENST00000638409 PAF1Q8N7H5 531 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 CCDC74AQ96AQ1 378 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 PAGR1Q9BTK6 254 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 CRKP46108 304 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 TCEA2Q15560 299 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 MTERF2Q49AM1 385 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 ZNF280DQ6N043 979 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 NEUROD6Q96NK8 337 aa9.47□□□□□ -0.89
SCARB2-209ENST00000638409 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-209ENST00000638409 CPNE3O75131 537 aaKnown RBP9.46□□□□□ -0.89
SCARB2-209ENST00000638409 HMOX1P09601 288 aa9.46□□□□□ -0.89
SCARB2-209ENST00000638409 GBP2P32456 591 aaPredicted RBP9.46□□□□□ -0.89
SCARB2-209ENST00000638409 ZRSR2Q15696 482 aaKnown RBP9.46□□□□□ -0.89
SCARB2-209ENST00000638409 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.89
SCARB2-209ENST00000638409 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.89
SCARB2-209ENST00000638409 CASS4Q9NQ75 786 aa9.46□□□□□ -0.89
SCARB2-209ENST00000638409 KLK14Q9P0G3 267 aa9.46□□□□□ -0.89
SCARB2-209ENST00000638409 C19orf67A6NJJ6 358 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-209ENST00000638409 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCARB2-209ENST00000638409 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 ASPSCR1Q9BZE9 553 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 INO80BQ9C086 356 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-209ENST00000638409 USP3Q9Y6I4 520 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 NHSQ6T4R5 1651 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 CYP27B1O15528 508 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 FAM163BP0C2L3 166 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-209ENST00000638409 PLEKHF1Q96S99 279 aa9.46□□□□□ -0.9
SCARB2-209ENST00000638409 PHKG2P15735 406 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 MAP3K11Q16584 847 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 INO80DQ53TQ3 878 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 IFNL2Q8IZJ0 200 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 ADAMTS7Q9UKP4 1686 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 GUCY2FP51841 1108 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 SRRTQ9BXP5 876 aaKnown RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
SCARB2-209ENST00000638409 MRPS23Q9Y3D9 190 aaKnown RBP9.45□□□□□ -0.9
SCARB2-209ENST00000638409 TNS1Q9HBL0 1735 aaKnown RBP9.44□□□□□ -0.9
SCARB2-209ENST00000638409 A0A087X0B3 334 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 RASGRF1Q13972 1273 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 STRIP2Q9ULQ0 834 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 TLR6Q9Y2C9 796 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
SCARB2-209ENST00000638409 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
SCARB2-209ENST00000638409 PRKAR2BP31323 418 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms