RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
SYNGAP1-224ENST00000637721 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
SYNGAP1-224ENST00000637721 SRRDQ9UH36 339 aa16.06■□□□□ 0.16
SYNGAP1-224ENST00000637721 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
SYNGAP1-224ENST00000637721 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
SYNGAP1-224ENST00000637721 ATAD5Q96QE3 1844 aa16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 GADL1Q6ZQY3 521 aa16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 PROCA1Q8NCQ7 364 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 ARHGAP39Q9C0H5 1083 aa16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 AS3MTQ9HBK9 375 aa16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
SYNGAP1-224ENST00000637721 MGAMO43451 1857 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 POTEFA5A3E0 1075 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 HMMRO75330 724 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 CAP2P40123 477 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 ZAP70P43403 619 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 FCGRTP55899 365 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 TRIM47Q96LD4 638 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 AGTPBP1Q9UPW5 1226 aa16.04■□□□□ 0.16
SYNGAP1-224ENST00000637721 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 FLT1P17948 1338 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 TRIM75PA6NK02 468 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 CYP2C8P10632 490 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 RAET1EQ8TD07 263 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
SYNGAP1-224ENST00000637721 MYPNQ86TC9 1320 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 HLA-DOAP06340 250 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 ASNSP08243 561 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 OSBPP22059 807 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 TTF1Q15361 905 aaPredicted RBP16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 AACSQ86V21 672 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 TGFBRAP1Q8WUH2 860 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.16
SYNGAP1-224ENST00000637721 SIPA1L1O43166 1804 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 IDH1O75874 414 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 SLC34A2O95436 690 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 SLURP2P0DP57 97 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 CAPN2P17655 700 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 CYP7A1P22680 504 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 CTGFP29279 349 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 SPP2Q13103 211 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 SH3D19Q5HYK7 790 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 ADGRA1Q86SQ6 560 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 MAPKAPK5Q8IW41 473 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
SYNGAP1-224ENST00000637721 FAM196BA6NMK8 535 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 RAB11FIP3O75154 756 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 EN2P19622 333 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-224ENST00000637721 GRK4P32298 578 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 GCLCP48506 637 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-224ENST00000637721 UBXN2AP68543 259 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 SLAIN1Q8ND83 568 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 NKX2-3Q8TAU0 364 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 SH3TC2Q8TF17 1288 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 GCC1Q96CN9 775 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 ZBTB40Q9NUA8 1239 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 MYH1P12882 1939 aa16■□□□□ 0.15
SYNGAP1-224ENST00000637721 BACE1P56817 501 aa15.99■□□□□ 0.15
SYNGAP1-224ENST00000637721 MAGEB6Q8N7X4 407 aa15.99■□□□□ 0.15
SYNGAP1-224ENST00000637721 C19orf81C9J6K1 198 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 USP5P45974 858 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 TREML2Q5T2D2 321 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 PXYLP1Q8TE99 480 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 COA7Q96BR5 231 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 EHD4Q9H223 541 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 PALD1Q9ULE6 856 aa15.98■□□□□ 0.15
SYNGAP1-224ENST00000637721 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 HMGCS2P54868 508 aa15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 DYNLL1P63167 89 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 PRKCZQ05513 592 aa15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 IRF5Q13568 498 aa15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
SYNGAP1-224ENST00000637721 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms