RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TMEM67Q5HYA8 995 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 PCDHB6Q9Y5E3 794 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 ARFGEF2Q9Y6D5 1785 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 SMYD4Q8IYR2 804 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 ANKZF1Q9H8Y5 726 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 CIAO1O76071 339 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 CCDC175P0C221 793 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 ZNF569Q5MCW4 686 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 NOSTRINQ8IVI9 506 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 AFMP43652 599 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 NR1I3Q14994 352 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 DIS3L2Q8IYB7 885 aaKnown RBP23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 IGDCC4Q8TDY8 1250 aa23.06■■□□□ 1.28
CACNA1A-243ENST00000637616 AKR1B15C9JRZ8 316 aaPredicted RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 PHACTR2O75167 634 aa23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 ENOX1Q8TC92 643 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 MORC3Q14149 939 aa23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 RRP12Q5JTH9 1297 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 CDC5LQ99459 802 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 PIH1D3Q9NQM4 214 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 ADGRG1Q9Y653 693 aa23.05■■□□□ 1.28
CACNA1A-243ENST00000637616 PDE4CQ08493 712 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 SRGAP1Q7Z6B7 1085 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 IGSF22Q8N9C0 903 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 KIF4BQ2VIQ3 1234 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 ABCB6Q9NP58 842 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 TOMM22Q9NS69 142 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 AKAP2Q9Y2D5 859 aa23.04■■□□□ 1.28
CACNA1A-243ENST00000637616 CCDC151A5D8V7 595 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 IFIT3O14879 490 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 MLKLQ8NB16 471 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 OXER1Q8TDS5 423 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 AK7Q96M32 723 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 SLC12A7Q9Y666 1083 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 FOXR1Q6PIV2 292 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 ACRBPQ8NEB7 543 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 ZSWIM5Q9P217 1185 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 ZNF532Q9HCE3 1301 aa23.03■■□□□ 1.28
CACNA1A-243ENST00000637616 MUM1L1Q5H9M0 696 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 METTL24Q5JXM2 366 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 BEND6Q5SZJ8 279 aaPredicted RBP23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 STAMQ92783 540 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 HOOK1Q9UJC3 728 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 TACC3Q9Y6A5 838 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 CD44P16070 742 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 ADD2P35612 726 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 SARSP49591 514 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 PPFIBP1Q86W92 1011 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 CSRNP2Q9H175 543 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 WWC3Q9ULE0 1092 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 MYO1CO00159 1063 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 MAP2K7O14733 419 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 CASP14P31944 242 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 JAKMIP3Q5VZ66 844 aa23.02■■□□□ 1.28
CACNA1A-243ENST00000637616 FAM205CA6NFA0 338 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 KIF5CO60282 957 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 MYO1BO43795 1136 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 PTPREP23469 700 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 SLC35F6Q8N357 371 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 RNF216Q9NWF9 866 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 FAN1Q9Y2M0 1017 aa23.01■■□□□ 1.27
CACNA1A-243ENST00000637616 CDC25AP30304 524 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 EPSTI1Q96J88 318 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 CABP5Q9NP86 173 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 CDC23Q9UJX2 597 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 SCN11AQ9UI33 1791 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
CACNA1A-243ENST00000637616 C4AP0C0L4 1744 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 C4BP0C0L5 1744 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 A0A1B0GTH6 734 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 MMP1P03956 469 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 EXOC4Q96A65 974 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 A0A087X0B3 334 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 ACTN4O43707 911 aaKnown RBP23■■□□□ 1.27
CACNA1A-243ENST00000637616 CCT6AP40227 531 aaKnown RBP23■■□□□ 1.27
CACNA1A-243ENST00000637616 IFIT5Q13325 482 aaKnown RBP23■■□□□ 1.27
CACNA1A-243ENST00000637616 BRD3Q15059 726 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 RSPH14Q9UHP6 348 aa23■■□□□ 1.27
CACNA1A-243ENST00000637616 SLIT3O75094 1523 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 hCG_1642624A0A1W2PR95 340 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 ANKRD65E5RJM6 399 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 VSNL1P62760 191 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 SAFBQ15424 915 aaKnown RBP eCLIP22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 APTXQ7Z2E3 356 aaKnown RBP22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 TICAM2Q86XR7 235 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 WDR19Q8NEZ3 1342 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 FXR1P51114 621 aaKnown RBP eCLIP22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 PLCD1P51178 756 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 SKIDA1Q1XH10 827 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 LDHAL6AQ6ZMR3 332 aa22.99■■□□□ 1.27
CACNA1A-243ENST00000637616 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms