RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 CXCL9Q07325 125 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 BRF1Q92994 677 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 DDX4Q9NQI0 724 aaKnown RBP18.07■□□□□ 0.48
CTSD-211ENST00000637387 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 SERPINA10Q9UK55 444 aa18.07■□□□□ 0.48
CTSD-211ENST00000637387 EAPPQ56P03 285 aaPredicted RBP18.06■□□□□ 0.48
CTSD-211ENST00000637387 CDC42EP5Q6NZY7 148 aa18.06■□□□□ 0.48
CTSD-211ENST00000637387 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
CTSD-211ENST00000637387 INTS4Q96HW7 963 aaKnown RBP18.06■□□□□ 0.48
CTSD-211ENST00000637387 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
CTSD-211ENST00000637387 KDM4AO75164 1064 aa18.05■□□□□ 0.48
CTSD-211ENST00000637387 EPS15P42566 896 aa18.05■□□□□ 0.48
CTSD-211ENST00000637387 EVCP57679 992 aa18.05■□□□□ 0.48
CTSD-211ENST00000637387 TRDNQ13061 729 aa18.05■□□□□ 0.48
CTSD-211ENST00000637387 STK11IPQ8N1F8 1099 aa18.05■□□□□ 0.48
CTSD-211ENST00000637387 ZSCAN31Q96LW9 406 aaPredicted RBP18.05■□□□□ 0.48
CTSD-211ENST00000637387 SH2B1Q9NRF2 756 aaPredicted RBP18.05■□□□□ 0.48
CTSD-211ENST00000637387 ZBTB12Q9Y330 459 aaPredicted RBP18.05■□□□□ 0.48
CTSD-211ENST00000637387 SH2B2O14492 632 aaPredicted RBP18.04■□□□□ 0.48
CTSD-211ENST00000637387 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
CTSD-211ENST00000637387 APOBRQ0VD83 1088 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 SLC4A8Q2Y0W8 1093 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 KRT23Q9C075 422 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 RNF41Q9H4P4 317 aaPredicted RBP18.04■□□□□ 0.48
CTSD-211ENST00000637387 CREBZFQ9NS37 354 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 LMOD1P29536 600 aaPredicted RBP18.04■□□□□ 0.48
CTSD-211ENST00000637387 PLCD1P51178 756 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 NECAB1Q8N987 351 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 SENP2Q9HC62 589 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 CLEC11AQ9Y240 323 aa18.04■□□□□ 0.48
CTSD-211ENST00000637387 ORC4O43929 436 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
CTSD-211ENST00000637387 NFIAQ12857 509 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 CIAPIN1Q6FI81 312 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 AGBL3Q8NEM8 1001 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 IGDCC4Q8TDY8 1250 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 USP40Q9NVE5 1235 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 SAP30BPQ9UHR5 308 aaKnown RBP18.03■□□□□ 0.48
CTSD-211ENST00000637387 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
CTSD-211ENST00000637387 PRDM1O75626 825 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 RRP12Q5JTH9 1297 aaKnown RBP18.02■□□□□ 0.48
CTSD-211ENST00000637387 USP50Q70EL3 339 aaPredicted RBP18.02■□□□□ 0.48
CTSD-211ENST00000637387 GTF3C6Q969F1 213 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 DYNLL2Q96FJ2 89 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 LY9Q9HBG7 655 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.48
CTSD-211ENST00000637387 CIZ1Q9ULV3 898 aaPredicted RBP18.02■□□□□ 0.48
CTSD-211ENST00000637387 PICALMQ13492 652 aa18.01■□□□□ 0.47
CTSD-211ENST00000637387 MAP1SQ66K74 1059 aaPredicted RBP18.01■□□□□ 0.47
CTSD-211ENST00000637387 OSBPL5Q9H0X9 879 aaPredicted RBP18.01■□□□□ 0.47
CTSD-211ENST00000637387 CHMP5Q9NZZ3 219 aa18.01■□□□□ 0.47
CTSD-211ENST00000637387 ANGEL1Q9UNK9 670 aaKnown RBP18.01■□□□□ 0.47
CTSD-211ENST00000637387 COL2A1P02458 1487 aaPredicted RBP18.01■□□□□ 0.47
CTSD-211ENST00000637387 PFKFB2O60825 505 aa18■□□□□ 0.47
CTSD-211ENST00000637387 DTNBO60941 627 aa18■□□□□ 0.47
CTSD-211ENST00000637387 CACNB3P54284 484 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SCRN1Q12765 414 aa18■□□□□ 0.47
CTSD-211ENST00000637387 STK3Q13188 491 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
CTSD-211ENST00000637387 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
CTSD-211ENST00000637387 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
CTSD-211ENST00000637387 MTA3Q9BTC8 594 aa18■□□□□ 0.47
CTSD-211ENST00000637387 IDI2Q9BXS1 227 aa18■□□□□ 0.47
CTSD-211ENST00000637387 TOMM22Q9NS69 142 aa18■□□□□ 0.47
CTSD-211ENST00000637387 FAM198AQ9UFP1 575 aa18■□□□□ 0.47
CTSD-211ENST00000637387 HPS5Q9UPZ3 1129 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SHTN1A0MZ66 631 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SPDYE6P0CI01 402 aa18■□□□□ 0.47
CTSD-211ENST00000637387 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
CTSD-211ENST00000637387 GMPSP49915 693 aaPredicted RBP18■□□□□ 0.47
CTSD-211ENST00000637387 FGD1P98174 961 aa18■□□□□ 0.47
CTSD-211ENST00000637387 PKP1Q13835 747 aa18■□□□□ 0.47
CTSD-211ENST00000637387 TNIP1Q15025 636 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SEC23AQ15436 765 aa18■□□□□ 0.47
CTSD-211ENST00000637387 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
CTSD-211ENST00000637387 SGMS1Q86VZ5 419 aa18■□□□□ 0.47
CTSD-211ENST00000637387 ESR2Q92731 530 aa18■□□□□ 0.47
CTSD-211ENST00000637387 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
CTSD-211ENST00000637387 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
CTSD-211ENST00000637387 ADARB2Q9NS39 739 aaKnown RBP18■□□□□ 0.47
CTSD-211ENST00000637387 MYH6P13533 1939 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 POLR3DP05423 398 aaPredicted RBP17.99■□□□□ 0.47
CTSD-211ENST00000637387 LIFRP42702 1097 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 RBM5P52756 815 aaKnown RBP eCLIP17.99■□□□□ 0.47
CTSD-211ENST00000637387 GABPAQ06546 454 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 ZFPM1Q8IX07 1006 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 MTMR14Q8NCE2 650 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 TDRD3Q9H7E2 651 aaKnown RBP17.99■□□□□ 0.47
CTSD-211ENST00000637387 CWC22Q9HCG8 908 aaKnown RBP17.99■□□□□ 0.47
CTSD-211ENST00000637387 NID2Q14112 1375 aa17.99■□□□□ 0.47
CTSD-211ENST00000637387 MYH15Q9Y2K3 1946 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms