RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 TNNC1P63316 161 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 CUL4AQ13619 759 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 NELFCDQ8IXH7 590 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 ERMNQ8TAM6 284 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 DDX17Q92841 729 aaKnown RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 LRRC27Q9C0I9 530 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 CEP104O60308 925 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 ZMYND10O75800 440 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 SP4Q02446 784 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 LRRC24Q50LG9 513 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 TTC19Q6DKK2 380 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 TYW1BQ6NUM6 668 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 TMTC1Q8IUR5 882 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 MRFAP1L1Q96HT8 127 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 TUBBP07437 444 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 GNAT2P19087 354 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 GUCY2FP51841 1108 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 IRX5P78411 483 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 MXRA7P84157 204 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 FAM47AQ5JRC9 791 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 STXBP4Q6ZWJ1 553 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 GSTA5Q7RTV2 222 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 PNMA8AQ86V59 439 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 CCDC50Q8IVM0 306 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 PPP1R14CQ8TAE6 165 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 NELFBQ8WX92 580 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 SECISBP2LQ93073 1101 aaKnown RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 RRP36Q96EU6 259 aaKnown RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 SETDB2Q96T68 719 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 GJB4Q9NTQ9 266 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 DBNLQ9UJU6 430 aaKnown RBP7.28□□□□□ -1.24
SCN2A-216ENST00000637367 IKBKGQ9Y6K9 419 aa7.28□□□□□ -1.24
SCN2A-216ENST00000637367 CTTNBP2Q8WZ74 1663 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 EDC4Q6P2E9 1401 aaKnown RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 ANKRD65E5RJM6 399 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 ENC1O14682 589 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 GIGYF1O75420 1035 aaPredicted RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 FGAP02671 866 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 RFC4P35249 363 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 HS2ST1Q7LGA3 356 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 DNAJC10Q8IXB1 793 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 SMYD4Q8IYR2 804 aaPredicted RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 ANKS4BQ8N8V4 417 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 PDE11AQ9HCR9 933 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 AATFQ9NY61 560 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 ATP6V0A2Q9Y487 856 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 SBNO1A3KN83 1393 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 SV2BQ7L1I2 683 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 DPH6Q7L8W6 267 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 CADPS2Q86UW7 1296 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 GRAMD1CQ8IYS0 662 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 SMARCC2Q8TAQ2 1214 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 MAP4K1Q92918 833 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 GPHNQ9NQX3 736 aaPredicted RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 TFCP2L1Q9NZI6 479 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 KIAA0556O60303 1618 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 RIMBP2O15034 1052 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 CCNT1O60563 726 aaKnown RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 IL2RBP14784 551 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 DESP17661 470 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 GNA11P29992 359 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 ACTN2P35609 894 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 LIG3P49916 1009 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 FCHSD1Q86WN1 690 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 C2CD5Q86YS7 1000 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 TCHPQ9BT92 498 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 NSRP1Q9H0G5 558 aaKnown RBP7.27□□□□□ -1.25
SCN2A-216ENST00000637367 SHANK2Q9UPX8 1470 aa7.27□□□□□ -1.25
SCN2A-216ENST00000637367 PFKFB2O60825 505 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 FAM13AO94988 1023 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 ATP1A3P13637 1013 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PDIA3P30101 505 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PPP1R7Q15435 360 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 RRAGAQ7L523 313 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 GPR161Q8N6U8 529 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 TDRD7Q8NHU6 1098 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PPANQ9NQ55 473 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 RASAL2Q9UJF2 1139 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 KIAA0232Q92628 1395 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 SPDYE3A6NKU9 549 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 CHMP2AO43633 222 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 HOXB7P09629 217 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 HERC4Q5GLZ8 1057 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 MAEAQ7L5Y9 396 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 SDR42E1Q8WUS8 393 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 CABS1Q96KC9 395 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PPP1R13BQ96KQ4 1090 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PSMD1Q99460 953 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PLVAPQ9BX97 442 aa7.26□□□□□ -1.25
SCN2A-216ENST00000637367 PUS3Q9BZE2 481 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 IQCGQ9H095 443 aaKnown RBP7.26□□□□□ -1.25
SCN2A-216ENST00000637367 DDX41Q9UJV9 622 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms