RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 PRDM5Q9NQX1 630 aaPredicted RBP3.28□□□□□ -1.88
SCN1A-215ENST00000637285 PICK1Q9NRD5 415 aa3.28□□□□□ -1.88
SCN1A-215ENST00000637285 KRT82Q9NSB4 513 aa3.28□□□□□ -1.88
SCN1A-215ENST00000637285 SLAMF8Q9P0V8 285 aa3.28□□□□□ -1.88
SCN1A-215ENST00000637285 CSADQ9Y600 493 aa3.28□□□□□ -1.88
SCN1A-215ENST00000637285 CNTNAP4Q9C0A0 1308 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 H3BS24 57 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 ERVFC1P60507 584 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 ZC3H12AQ5D1E8 599 aaKnown RBP3.27□□□□□ -1.89
SCN1A-215ENST00000637285 RPS26P11Q5JNZ5 115 aaPredicted RBP3.27□□□□□ -1.89
SCN1A-215ENST00000637285 MYLIPQ8WY64 445 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 CCDC120Q96HB5 630 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 ALPK1Q96QP1 1244 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 TMPRSS5Q9H3S3 457 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 ABCB6Q9NP58 842 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 NPHS2Q9NP85 383 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 SEMA3GQ9NS98 782 aa3.27□□□□□ -1.89
SCN1A-215ENST00000637285 GPN3Q9UHW5 284 aaPredicted RBP3.27□□□□□ -1.89
SCN1A-215ENST00000637285 TMEM238LA0A1B0GVL6 79 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 PRR33A8MZF0 331 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 GADD45BO75293 160 aaPredicted RBP3.26□□□□□ -1.89
SCN1A-215ENST00000637285 EOMESO95936 686 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 NPR3P17342 541 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 HK2P52789 917 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 ERVK-24P63145 666 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 PTPN12Q05209 780 aaKnown RBP3.26□□□□□ -1.89
SCN1A-215ENST00000637285 PPP2R3AQ06190 1150 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 PPM1JQ5JR12 505 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 MAP1SQ66K74 1059 aaPredicted RBP3.26□□□□□ -1.89
SCN1A-215ENST00000637285 UBE3DQ7Z6J8 389 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 ACSBG1Q96GR2 724 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 KCNC2Q96PR1 638 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 ANO2Q9NQ90 1003 aa3.26□□□□□ -1.89
SCN1A-215ENST00000637285 DNAJC25-GNG10A0A024R161 153 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 TRHRP34981 398 aaPredicted RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 KRTAP10-2P60368 255 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 FGD1P98174 961 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 SKOR2Q2VWA4 1001 aaPredicted RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 RALGPS1Q5JS13 557 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 TCERG1LQ5VWI1 586 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 CDC37L1Q7L3B6 337 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 PDZD3Q86UT5 571 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 SULF2Q8IWU5 870 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 MARCH10Q8NA82 808 aaPredicted RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 BAHD1Q8TBE0 780 aaPredicted RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 STK35Q8TDR2 534 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 UBE2FQ969M7 185 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 DNAJC25Q9H1X3 360 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 ZSWIM5Q9P217 1185 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 CNOT6Q9ULM6 557 aaKnown RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 TPX2Q9ULW0 747 aaKnown RBP3.25□□□□□ -1.89
SCN1A-215ENST00000637285 MAPK8IP1Q9UQF2 711 aa3.25□□□□□ -1.89
SCN1A-215ENST00000637285 DCDC2CA8MYV0 355 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 PSPNO60542 156 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 TRIM13O60858 407 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 ABL1P00519 1130 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 NEFLP07196 543 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 DLG4P78352 724 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 ORC1Q13415 861 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 SFRP5Q5T4F7 317 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 TMEM132EQ6IEE7 984 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 DTHD1Q6ZMT9 781 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 ARMCX6Q7L4S7 300 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 ZNF605Q86T29 641 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 C12orf40Q86WS4 652 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 MFSD4AQ8N468 514 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 CXorf38Q8TB03 319 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 GPBAR1Q8TDU6 330 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 RNF32Q9H0A6 362 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 CBX8Q9HC52 389 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 TMEM39AQ9NV64 488 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 RTEL1Q9NZ71 1219 aa3.24□□□□□ -1.89
SCN1A-215ENST00000637285 CPNE3O75131 537 aaKnown RBP3.23□□□□□ -1.89
SCN1A-215ENST00000637285 CBX7O95931 251 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 CELA3BP08861 270 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 SRFP11831 508 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 ARNTP27540 789 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 NTF4P34130 210 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 FCGRTP55899 365 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 NFKB2Q00653 900 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 FKBP4Q02790 459 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCN1A-215ENST00000637285 SF3B2Q13435 895 aaKnown RBP3.23□□□□□ -1.89
SCN1A-215ENST00000637285 ZNF385BQ569K4 471 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 PRPF40BQ6NWY9 871 aaKnown RBP3.23□□□□□ -1.89
SCN1A-215ENST00000637285 MPRIPQ6WCQ1 1025 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 SGPP1Q9BX95 441 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 MCOLN1Q9GZU1 580 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 ADAMTS10Q9H324 1103 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 C19orf44Q9H6X5 657 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 TMEM59LQ9UK28 342 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 TRAK1Q9UPV9 953 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 KCTD3Q9Y597 815 aa3.23□□□□□ -1.89
SCN1A-215ENST00000637285 MYOCOSA0A1B0GUC4 107 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 RBAK-RBAKDNI3L0D1 243 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 RFXAPO00287 272 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 SASH1O94885 1247 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 SLITRK5O94991 958 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 HPXP02790 462 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 ADRB1P08588 477 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 ZNF211Q13398 564 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms