RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
CLN5-213ENST00000636681 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 MYO1BO43795 1136 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 ENTPD3O75355 529 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 ANTXR2P58335 489 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
CLN5-213ENST00000636681 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 NBPF12Q5TAG4 269 aaPredicted RBP12.65□□□□□ -0.38
CLN5-213ENST00000636681 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 DEFB129Q9H1M3 183 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 ANAPC4Q9UJX5 808 aa12.65□□□□□ -0.38
CLN5-213ENST00000636681 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLN5-213ENST00000636681 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 DTNBO60941 627 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 JAG1P78504 1218 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 ATRNL1Q5VV63 1379 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 NMT2O60551 498 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 KDM4AO75164 1064 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 CDK8P49336 464 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 GABPAQ06546 454 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 RNF20Q5VTR2 975 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 MAP1SQ66K74 1059 aaPredicted RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
CLN5-213ENST00000636681 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
CLN5-213ENST00000636681 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 RASA1P20936 1047 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 SHMT1P34896 483 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 NEK4P51957 841 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 FAM83AQ86UY5 434 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 IL17RAQ96F46 866 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
CLN5-213ENST00000636681 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
CLN5-213ENST00000636681 RANBP6O60518 1105 aaKnown RBP12.62□□□□□ -0.39
CLN5-213ENST00000636681 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
CLN5-213ENST00000636681 MMP14P50281 582 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 ANAPC15P60006 121 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 PRKG1Q13976 671 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 FKBP1CQ5VVH2 108 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 USP50Q70EL3 339 aaPredicted RBP12.62□□□□□ -0.39
CLN5-213ENST00000636681 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
CLN5-213ENST00000636681 IQCA1LA6NCM1 817 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 TRAF5O00463 557 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 GDF11O95390 407 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 FGRP09769 529 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 AKR1B1P15121 316 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 TTC6Q86TZ1 520 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 PRC1O43663 620 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 EXOSC10Q01780 885 aaKnown RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 BLOC1S2Q6QNY1 142 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 CCDC84Q86UT8 332 aaPredicted RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 TTC14Q96N46 770 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
CLN5-213ENST00000636681 PI4KBQ9UBF8 816 aa12.61□□□□□ -0.39
CLN5-213ENST00000636681 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
CLN5-213ENST00000636681 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
CLN5-213ENST00000636681 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 TNNI2P48788 182 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 AK2P54819 239 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 TFAP4Q01664 338 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
CLN5-213ENST00000636681 Q6ZUG5 572 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 MOB2Q70IA6 237 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
CLN5-213ENST00000636681 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms