RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ANKRD20A4Q4UJ75 823 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 ANKRD20A2Q5SQ80 823 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 ANKRD20A1Q5TYW2 823 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 CEP85Q6P2H3 762 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 C4orf50Q6ZRC1 276 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 C16orf62Q7Z3J2 963 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 HEATR3Q7Z4Q2 680 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 DAPK1P53355 1430 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 PFDN1O60925 122 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 TMCC1O94876 653 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 FSIP1Q8NA03 581 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 MAIP1Q8WWC4 291 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 NLRP7Q8WX94 980 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 GCNAQ96QF7 691 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 ATF7P17544 494 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 ARHGDIAP52565 204 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PTK2BQ14289 1009 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PRPSAP1Q14558 356 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 MUM1Q2TAK8 710 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 NBPF1Q3BBV0 1214 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 ESR2Q92731 530 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 RTL9Q8NET4 1388 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SUPT6HQ7KZ85 1726 aaKnown RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 KRT7P08729 469 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PRKCQQ04759 706 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 NBPF8Q3BBV2 869 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 CCDC122Q5T0U0 273 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 RRAGBQ5VZM2 374 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 RNF207Q6ZRF8 634 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SYCE1Q8N0S2 351 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PRIMPOLQ96LW4 560 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 VAT1LQ9HCJ6 419 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 HHATQ5VTY9 493 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 DCUN1D2Q6PH85 259 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 TRIM50Q86XT4 487 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SMIM23A6NLE4 172 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 GNGT2O14610 69 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SYKP43405 635 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 BPIFB4P59827 614 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 ASIC1P78348 528 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 TCIRG1Q13488 830 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 PPP2R5EQ16537 467 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 E4F1Q66K89 784 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 RBM46Q8TBY0 533 aaKnown RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 TEX28O15482 410 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 CCDC159P0C7I6 412 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 IL1RL1Q01638 556 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 DENND2CQ68D51 928 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 N4BP2L2Q92802 583 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 ABHD8Q96I13 439 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 EFCC1Q9HA90 598 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 CALUO43852 315 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-212ENST00000636194 BCRP11274 1271 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 MCM7P33993 719 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 HDXQ7Z353 690 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 VPS8Q8N3P4 1428 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 TBC1D22AQ8WUA7 517 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SCINQ9Y6U3 715 aa6.64□□□□□ -1.35
SCN1A-212ENST00000636194 SLC8A1P32418 973 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 CARSP49589 748 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 DHX29Q7Z478 1369 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 ARHGEF37A1IGU5 675 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NVLO15381 856 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 EVI5O60447 810 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 KRT9P35527 623 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TSTA3Q13630 321 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 HP1BP3Q5SSJ5 553 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 MCF2L2Q86YR7 1114 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 SRRM1Q8IYB3 904 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 PHF21AQ96BD5 680 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 EPAS1Q99814 870 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NYXQ9GZU5 481 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 ZHX1Q9UKY1 873 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 RAD50Q92878 1312 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 SNTNA6NMZ2 147 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TROVE2P10155 538 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 HLA-DPA1P20036 260 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 FSCBQ5H9T9 825 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 CCDC84Q86UT8 332 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 FAM193BQ96PV7 902 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TMX1Q9H3N1 280 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 CABP2Q9NPB3 220 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 GNAT3A8MTJ3 354 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NAPAP54920 295 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 WTAPQ15007 396 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 AZI2Q9H6S1 392 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 FHOD3Q2V2M9 1422 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NBNO60934 754 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 PTPREP23469 700 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 BRD2P25440 801 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 KRT2P35908 639 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 EIF2B5Q13144 721 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 GJC2Q5T442 439 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 NXNQ6DKJ4 435 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms