RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-228ENST00000635853 GRIN2BQ13224 1484 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 KDM5DQ9BY66 1539 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 SPAG1Q07617 926 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 CYP26C1Q6V0L0 522 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 IFT20Q8IY31 132 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 LMBR1Q8WVP7 490 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 NEK1Q96PY6 1258 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 HPDP32754 393 aaPredicted RBP10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 E2F5Q15329 346 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 RTN1Q16799 776 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 CALR3Q96L12 384 aaKnown RBP10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 SH2D4AQ9H788 454 aa10.96□□□□□ -0.66
SPTAN1-228ENST00000635853 M0QZ92 97 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 APBA1Q02410 837 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 SUGP1Q8IWZ8 645 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 CCHCR1Q8TD31 782 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 BRF1Q92994 677 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 DDB1Q16531 1140 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 CHAMP1Q96JM3 812 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 ZNF521Q96K83 1311 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 TULP2O00295 520 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 DAPK3O43293 454 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 ARID5AQ03989 594 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 TCIRG1Q13488 830 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 TRIM14Q14142 442 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.663e-6■■□□□ 11.8
SPTAN1-228ENST00000635853 GSDMBQ8TAX9 411 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 ZCRB1Q8TBF4 217 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 SEC62Q99442 399 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 TPX2Q9ULW0 747 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 CREB3O43889 395 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 BMP15O95972 392 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 KRT5P13647 590 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 PLCG2P16885 1265 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 CEP85Q6P2H3 762 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 IFT81Q8WYA0 676 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 CDC23Q9UJX2 597 aa10.95□□□□□ -0.66
SPTAN1-228ENST00000635853 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 CUL4AQ13619 759 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 PPP1R7Q15435 360 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 SARM1Q6SZW1 724 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 RAB3IPQ96QF0 476 aaPredicted RBP10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 SNAPC4Q5SXM2 1469 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 SPTLC2O15270 562 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 ZBTB43O43298 467 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 DDIT3P35638 169 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 CASP8Q14790 479 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 SETDB1Q15047 1291 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 DYNC1I2Q13409 638 aaKnown RBP10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 MAP7Q14244 749 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 PPP1R21Q6ZMI0 780 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 ECHDC1Q9NTX5 307 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 SNX14Q9Y5W7 946 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 AGTPBP1Q9UPW5 1226 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
SPTAN1-228ENST00000635853 PFDN1O60925 122 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 ALDH3A1P30838 453 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 RANBP1P43487 201 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 RBM6P78332 1123 aaKnown RBP10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 CCDC89Q8N998 374 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 RTL9Q8NET4 1388 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 NOP56O00567 594 aaKnown RBP10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 DTNBP1Q96EV8 351 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 BATF3Q9NR55 127 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 KIF22Q14807 665 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 NBPF20Q3BBV1 942 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 FNBP1Q96RU3 617 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 RBM8AQ9Y5S9 174 aaKnown RBP10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 ANKRD65E5RJM6 399 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 IFT88Q13099 833 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 MTX1Q13505 466 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 EAPPQ56P03 285 aaPredicted RBP10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 CCDC122Q5T0U0 273 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 PPP1R12CQ9BZL4 782 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 VCX3BQ9H321 246 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 VCX3AQ9NNX9 186 aa10.93□□□□□ -0.66
SPTAN1-228ENST00000635853 TNNC1P63316 161 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 BIRC3Q13489 604 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 CRYMQ14894 314 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 HSP90AA4PQ58FG1 418 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 TRIM68Q6AZZ1 485 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 C8orf74Q6P047 294 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 ABCB6Q9NP58 842 aa10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 ZCCHC17Q9NP64 241 aaKnown RBP10.92□□□□□ -0.66
SPTAN1-228ENST00000635853 HAUS2Q9NVX0 235 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms