RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 MTMR6Q9Y217 621 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 TNKSO95271 1327 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 RXRAP19793 462 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 CRKP46108 304 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 SOGA3Q5TF21 947 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 APOBEC3HQ6NTF7 200 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 LARGE2Q8N3Y3 721 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 DDX11L8A8MPP1 907 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 SLC3A2P08195 630 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 PLCD1P51178 756 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 PICALMQ13492 652 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 WTAPQ15007 396 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 SEC23AQ15436 765 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-216ENST00000635742 ARFGEF1Q9Y6D6 1849 aa11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 VPS37CA5D8V6 355 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 ZBTB43O43298 467 aa11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 F13A1P00488 732 aa11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 SART3Q15020 963 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 FAM47AQ5JRC9 791 aa11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.53
CACNA1A-216ENST00000635742 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
CACNA1A-216ENST00000635742 NID2Q14112 1375 aa11.71□□□□□ -0.54
CACNA1A-216ENST00000635742 CCDC69A6NI79 296 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 NFKBIEO00221 500 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 CDC27P30260 824 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 PDE4BQ07343 736 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 CCDC144CPQ8IYA2 1237 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 NLGN2Q8NFZ4 835 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 ERICH2A1L162 156 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 NMT2O60551 498 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 RAD17O75943 681 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 FDPSP14324 419 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 PDCP20941 246 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 FOSBP53539 338 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 HDLBPQ00341 1268 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 FOXD4L6Q3SYB3 417 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 FOXD4L3Q6VB84 417 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 TAOK3Q9H2K8 898 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 MYH8P13535 1937 aa11.7□□□□□ -0.54
CACNA1A-216ENST00000635742 TCHHQ07283 1943 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 PSMD14O00487 310 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 PDE4CQ08493 712 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 NFIAQ12857 509 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 IQCA1Q86XH1 822 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 FAM184AQ8NB25 1140 aa11.69□□□□□ -0.54
CACNA1A-216ENST00000635742 TSPY2A6NKD2 308 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 CPLX1O14810 134 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 CACNB3P54284 484 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 VIL1P09327 827 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 RASA1P20936 1047 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 NTRK3Q16288 839 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms