RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GPR25O00155 361 aa18.97■□□□□ 0.63
LINC00339-207ENST00000634712 ERC2O15083 957 aa18.97■□□□□ 0.63
LINC00339-207ENST00000634712 SLURP2P0DP57 97 aa18.97■□□□□ 0.63
LINC00339-207ENST00000634712 CFHR5Q9BXR6 569 aa18.97■□□□□ 0.63
LINC00339-207ENST00000634712 ZHX2Q9Y6X8 837 aa18.97■□□□□ 0.63
LINC00339-207ENST00000634712 ADD2P35612 726 aa18.96■□□□□ 0.63
LINC00339-207ENST00000634712 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
LINC00339-207ENST00000634712 RIOK1Q9BRS2 568 aaKnown RBP18.96■□□□□ 0.63
LINC00339-207ENST00000634712 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
LINC00339-207ENST00000634712 TCRBV5S4A2TA0A5A2 114 aa18.95■□□□□ 0.62
LINC00339-207ENST00000634712 PTPRAP18433 802 aa18.95■□□□□ 0.62
LINC00339-207ENST00000634712 DGKZQ13574 1117 aa18.95■□□□□ 0.62
LINC00339-207ENST00000634712 SLC4A8Q2Y0W8 1093 aa18.95■□□□□ 0.62
LINC00339-207ENST00000634712 NOM1Q5C9Z4 860 aaKnown RBP18.95■□□□□ 0.62
LINC00339-207ENST00000634712 TTC6Q86TZ1 520 aa18.95■□□□□ 0.62
LINC00339-207ENST00000634712 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
LINC00339-207ENST00000634712 CXCL11O14625 94 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 FKTNO75072 461 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 POLR3DP05423 398 aaPredicted RBP18.94■□□□□ 0.62
LINC00339-207ENST00000634712 UBE3CQ15386 1083 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
LINC00339-207ENST00000634712 R3HDMLQ9H3Y0 253 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
LINC00339-207ENST00000634712 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
LINC00339-207ENST00000634712 MX1P20591 662 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 CAP2P40123 477 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 CRHR2Q13324 411 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
LINC00339-207ENST00000634712 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 BTBD19C9JJ37 291 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 CAPN15O75808 1086 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 MBD4O95243 580 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 LCORLQ8N3X6 602 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 KBTBD3Q8NAB2 608 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 ARMT1Q9H993 441 aa18.93■□□□□ 0.62
LINC00339-207ENST00000634712 ZCCHC17Q9NP64 241 aaKnown RBP18.93■□□□□ 0.62
LINC00339-207ENST00000634712 LAMB1P07942 1786 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 SLFNL1Q499Z3 407 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 FOCADQ5VW36 1801 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 FASTKD5Q7L8L6 764 aaKnown RBP18.92■□□□□ 0.62
LINC00339-207ENST00000634712 CTU1Q7Z7A3 348 aaKnown RBP18.92■□□□□ 0.62
LINC00339-207ENST00000634712 METTL16Q86W50 562 aaKnown RBP18.92■□□□□ 0.62
LINC00339-207ENST00000634712 OTUD7AQ8TE49 926 aaPredicted RBP18.92■□□□□ 0.62
LINC00339-207ENST00000634712 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 MCOLN1Q9GZU1 580 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 SERPINB13Q9UIV8 391 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 AFG3L2Q9Y4W6 797 aa18.92■□□□□ 0.62
LINC00339-207ENST00000634712 TRIM75PA6NK02 468 aa18.91■□□□□ 0.62
LINC00339-207ENST00000634712 B4GALNT3Q6L9W6 998 aa18.91■□□□□ 0.62
LINC00339-207ENST00000634712 ANKRD23Q86SG2 305 aa18.91■□□□□ 0.62
LINC00339-207ENST00000634712 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
LINC00339-207ENST00000634712 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
LINC00339-207ENST00000634712 MYH1P12882 1939 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-207ENST00000634712 ASNSP08243 561 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 IRX6P78412 446 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-207ENST00000634712 GADL1Q6ZQY3 521 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 AMOTL1Q8IY63 956 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
LINC00339-207ENST00000634712 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-207ENST00000634712 A0A0G2JLL6 359 aaPredicted RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 PDHXO00330 501 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 RNF113AO15541 343 aaKnown RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 SP3Q02447 781 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 PRRT2Q7Z6L0 340 aaPredicted RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 CCDC84Q86UT8 332 aaPredicted RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 ZNF280CQ8ND82 737 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 PI4K2BQ8TCG2 481 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 ERO1AQ96HE7 468 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 ABHD8Q96I13 439 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 LNPKQ9C0E8 428 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 EHD4Q9H223 541 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.61
LINC00339-207ENST00000634712 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 SLC4A4Q9Y6R1 1079 aa18.89■□□□□ 0.61
LINC00339-207ENST00000634712 DOCK1Q14185 1865 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 GDF11O95390 407 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 IGHDP01880 384 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 CHGBP05060 677 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 PLCD1P51178 756 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 SPP2Q13103 211 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 PKN2Q16513 984 aaKnown RBP18.88■□□□□ 0.61
LINC00339-207ENST00000634712 SMC5Q8IY18 1101 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 FSD1Q9BTV5 496 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
LINC00339-207ENST00000634712 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
LINC00339-207ENST00000634712 MYH7P12883 1935 aa18.87■□□□□ 0.61
LINC00339-207ENST00000634712 PRKAB2O43741 272 aa18.87■□□□□ 0.61
LINC00339-207ENST00000634712 TLR2O60603 784 aa18.87■□□□□ 0.61
LINC00339-207ENST00000634712 ARHGEF6Q15052 776 aa18.87■□□□□ 0.61
LINC00339-207ENST00000634712 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
LINC00339-207ENST00000634712 APPBP2Q92624 585 aa18.87■□□□□ 0.61
LINC00339-207ENST00000634712 PDE1AP54750 535 aa18.86■□□□□ 0.61
LINC00339-207ENST00000634712 TATDN1Q6P1N9 297 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms