RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 GPBAR1Q8TDU6 330 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 CARNS1A5YM72 827 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 NFIBO00712 420 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 GPR182O15218 404 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 ARNTP27540 789 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 BUD31P41223 144 aaPredicted RBP6.11□□□□□ -1.43
VPS8-228ENST00000628962 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 UBE3DQ7Z6J8 389 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 CITED4Q96RK1 184 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 CARS2Q9HA77 564 aaKnown RBP6.11□□□□□ -1.43
VPS8-228ENST00000628962 SEMA3GQ9NS98 782 aa6.11□□□□□ -1.43
VPS8-228ENST00000628962 GNAT3A8MTJ3 354 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 H3BRB1 525 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 PPP1R15AO75807 674 aaPredicted RBP6.1□□□□□ -1.43
VPS8-228ENST00000628962 GDNFP39905 211 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 FCGRTP55899 365 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 RING1Q06587 406 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 PPM1JQ5JR12 505 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 MAP1SQ66K74 1059 aaPredicted RBP6.1□□□□□ -1.43
VPS8-228ENST00000628962 EPS8L3Q8TE67 593 aaKnown RBP6.1□□□□□ -1.43
VPS8-228ENST00000628962 TUT1Q9H6E5 874 aaKnown RBP6.1□□□□□ -1.43
VPS8-228ENST00000628962 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
VPS8-228ENST00000628962 NME2P22392 152 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 GLYCTKQ8IVS8 523 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 DIRC2Q96SL1 478 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 FOXQ1Q9C009 403 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 NIF3L1Q9GZT8 377 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 NSUN3Q9H649 340 aaKnown RBP6.09□□□□□ -1.43
VPS8-228ENST00000628962 CD320Q9NPF0 282 aa6.09□□□□□ -1.43
VPS8-228ENST00000628962 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 XRCC5P13010 732 aaKnown RBP6.08□□□□□ -1.44
VPS8-228ENST00000628962 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 NPAS4Q8IUM7 802 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 CSRNP1Q96S65 589 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 EMILIN2Q9BXX0 1053 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 ATP13A1Q9HD20 1204 aa6.08□□□□□ -1.44
VPS8-228ENST00000628962 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
VPS8-228ENST00000628962 FANCGO15287 622 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 MED14OSP0DP75 135 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 SERPINB4P48594 390 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 ACSBG1Q96GR2 724 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 CSADQ9Y600 493 aa6.07□□□□□ -1.44
VPS8-228ENST00000628962 PRR33A8MZF0 331 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 INHBBP09529 407 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 TMEM253P0C7T8 217 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 KCNA10Q16322 511 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 ALKBH8Q96BT7 664 aaKnown RBP6.06□□□□□ -1.44
VPS8-228ENST00000628962 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 KCNK12Q9HB15 430 aa6.06□□□□□ -1.44
VPS8-228ENST00000628962 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 ARID3CA6NKF2 412 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 DCDC2CA8MYV0 355 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 ZBTB37Q5TC79 503 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 ATG14Q6ZNE5 492 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 ARMCX6Q7L4S7 300 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 BCO2Q9BYV7 579 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 PPP4R2Q9NY27 417 aa6.05□□□□□ -1.44
VPS8-228ENST00000628962 LRIG2O94898 1065 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 TRIM37O94972 964 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 SLITRK5O94991 958 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 BMP6P22004 513 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 GLDCP23378 1020 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 KCT2Q8NC54 265 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 GRIN3AQ8TCU5 1115 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 CCDC120Q96HB5 630 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 NECAB3Q96P71 396 aaPredicted RBP6.04□□□□□ -1.44
VPS8-228ENST00000628962 ALPK1Q96QP1 1244 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 CBX8Q9HC52 389 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 AKAP2Q9Y2D5 859 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 ST14Q9Y5Y6 855 aa6.04□□□□□ -1.44
VPS8-228ENST00000628962 FAM155AB1AL88 458 aaPredicted RBP6.03□□□□□ -1.44
VPS8-228ENST00000628962 H3BS24 57 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 ETV2O00321 342 aaPredicted RBP6.03□□□□□ -1.44
VPS8-228ENST00000628962 CTSWP56202 376 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 CIAPIN1Q6FI81 312 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 CDC37L1Q7L3B6 337 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 MFSD4AQ8N468 514 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 DMRTB1Q96MA1 342 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 EPB41L4BQ9H329 900 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 DCP1AQ9NPI6 582 aaPredicted RBP6.03□□□□□ -1.44
VPS8-228ENST00000628962 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 NLRP2Q9NX02 1062 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 SMG5Q9UPR3 1016 aaKnown RBP6.03□□□□□ -1.44
VPS8-228ENST00000628962 CAPN6Q9Y6Q1 641 aa6.03□□□□□ -1.44
VPS8-228ENST00000628962 TCAF2A6NFQ2 919 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 SFRP5Q5T4F7 317 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 CDKAL1Q5VV42 579 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 HOMEZQ8IX15 550 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 C3orf58Q8NDZ4 430 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 ABHD4Q8TB40 342 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 TMC1Q8TDI8 760 aa6.02□□□□□ -1.45
VPS8-228ENST00000628962 ENC1O14682 589 aa6.01□□□□□ -1.45
VPS8-228ENST00000628962 HOXA5P20719 270 aa6.01□□□□□ -1.45
VPS8-228ENST00000628962 THAP5Q7Z6K1 395 aa6.01□□□□□ -1.45
VPS8-228ENST00000628962 CCDC82Q8N4S0 544 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms