RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 BAG3O95817 575 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 CYP2C8P10632 490 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 PLCG2P16885 1265 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 GADL1Q6ZQY3 521 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 NOL10Q9BSC4 688 aaKnown RBP15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 SIPA1L1O43166 1804 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
SOX2-OT-247ENST00000628347 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 LOC285556D6RIA3 1793 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 MYPNQ86TC9 1320 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 FMNL1O95466 1100 aaPredicted RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 FCGRTP55899 365 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 PROCA1Q8NCQ7 364 aaPredicted RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
SOX2-OT-247ENST00000628347 TRIM75PA6NK02 468 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 GRK4P32298 578 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 CAP2P40123 477 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 ZAP70P43403 619 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 EAF2Q96CJ1 260 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 GCC1Q96CN9 775 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
SOX2-OT-247ENST00000628347 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 SH3D19Q5HYK7 790 aa15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 ADGRA1Q86SQ6 560 aa15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 ERC1Q8IUD2 1116 aa15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 PNMA3Q9UL41 463 aa15.25■□□□□ 0.03
SOX2-OT-247ENST00000628347 FLT1P17948 1338 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 USP17L5A8MUK1 530 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 PRKCZQ05513 592 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 SPP2Q13103 211 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 TREML2Q5T2D2 321 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 FOXP4Q8IVH2 680 aaPredicted RBP15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 PIH1D3Q9NQM4 214 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 GINM1Q9NU53 330 aa15.24■□□□□ 0.03
SOX2-OT-247ENST00000628347 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 MS4A1P11836 297 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 MTFR1Q15390 333 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 FAM110CQ1W6H9 321 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 MAPKAPK5Q8IW41 473 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
SOX2-OT-247ENST00000628347 ASNSP08243 561 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 UBXN2AP68543 259 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 IRF5Q13568 498 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 HSP90AB4PQ58FF6 505 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 PANK1Q8TE04 598 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 GABRQQ9UN88 632 aa15.22■□□□□ 0.03
SOX2-OT-247ENST00000628347 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 GJB1P08034 283 aa15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 CYP7A1P22680 504 aa15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 GCLCP48506 637 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 HMGCS2P54868 508 aa15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 EXOC6BQ9Y2D4 811 aa15.21■□□□□ 0.03
SOX2-OT-247ENST00000628347 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.02
SOX2-OT-247ENST00000628347 MYH1P12882 1939 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 ADCY3O60266 1144 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 HLA-DOAP06340 250 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 CCL5P13501 91 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 CAPN2P17655 700 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 GJA8P48165 433 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 FLT3LGP49771 235 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 BACE1P56817 501 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
SOX2-OT-247ENST00000628347 C19orf81C9J6K1 198 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 JAG1P78504 1218 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms