RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 DNAJC5GQ8N7S2 189 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHD2-213ENST00000628118 OSBP2Q969R2 916 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 STRBPQ96SI9 672 aaKnown RBP9.65□□□□□ -0.86
CHD2-213ENST00000628118 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
CHD2-213ENST00000628118 EHD4Q9H223 541 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 GINM1Q9NU53 330 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
CHD2-213ENST00000628118 ZNF112Q9UJU3 913 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 CSADQ9Y600 493 aa9.65□□□□□ -0.86
CHD2-213ENST00000628118 MYH1P12882 1939 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 WDR33Q9C0J8 1336 aaKnown RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 UBE2Q2LH0YL09 131 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 GPAA1O43292 621 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 SLC10A3P09131 477 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 ZBTB48P10074 688 aaPredicted RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 ZNF157P51786 506 aaPredicted RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 MCMDC2Q4G0Z9 681 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 NOL9Q5SY16 702 aaKnown RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 CAPNS2Q96L46 248 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 NACAP1Q9BZK3 213 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 ARMT1Q9H993 441 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 DCP1AQ9NPI6 582 aaPredicted RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 ARPP21Q9UBL0 812 aaPredicted RBP9.64□□□□□ -0.87
CHD2-213ENST00000628118 SLC4A4Q9Y6R1 1079 aa9.64□□□□□ -0.87
CHD2-213ENST00000628118 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
CHD2-213ENST00000628118 CTNND1O60716 968 aaKnown RBP9.63□□□□□ -0.87
CHD2-213ENST00000628118 POLR3DP05423 398 aaPredicted RBP9.63□□□□□ -0.87
CHD2-213ENST00000628118 SDSP20132 328 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 PRKG1Q13976 671 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
CHD2-213ENST00000628118 RASAL3Q86YV0 1011 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 JMYQ8N9B5 988 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 RUFY2Q8WXA3 655 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 SLC10A4Q96EP9 437 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 WRNIP1Q96S55 665 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD2-213ENST00000628118 DIAPH3Q9NSV4 1193 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 MCM9Q9NXL9 1143 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 SWAP70Q9UH65 585 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 SERPINB13Q9UIV8 391 aa9.63□□□□□ -0.87
CHD2-213ENST00000628118 CIZ1Q9ULV3 898 aaPredicted RBP9.63□□□□□ -0.87
CHD2-213ENST00000628118 RAD50Q92878 1312 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 NAV1Q8NEY1 1877 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 FAM155AB1AL88 458 aaPredicted RBP9.62□□□□□ -0.87
CHD2-213ENST00000628118 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
CHD2-213ENST00000628118 VEGFBP49765 207 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 INHBEP58166 350 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 HTRA3P83110 453 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 MAP2K1Q02750 393 aaPredicted RBP9.62□□□□□ -0.87
CHD2-213ENST00000628118 PPATQ06203 517 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 VGLL4Q14135 290 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 SBK1Q52WX2 424 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 BMP2KLQ5H9B9 411 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 CYP4F22Q6NT55 531 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.62□□□□□ -0.87
CHD2-213ENST00000628118 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 MIGA2Q7L4E1 593 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 ERO1BQ86YB8 467 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 SCYL3Q8IZE3 742 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
CHD2-213ENST00000628118 SDR42E1Q8WUS8 393 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 ZNF287Q9HBT7 754 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
CHD2-213ENST00000628118 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 MANSC4A6NHS7 340 aaPredicted RBP9.61□□□□□ -0.87
CHD2-213ENST00000628118 SPDYE5A6NIY4 337 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 M0R2C6 588 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 NT5C2P49902 561 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 CLCN6P51797 869 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 ALX1Q15699 326 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 WNK4Q96J92 1243 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
CHD2-213ENST00000628118 SAP30BPQ9UHR5 308 aaKnown RBP9.61□□□□□ -0.87
CHD2-213ENST00000628118 DDX60LQ5H9U9 1706 aaKnown RBP9.61□□□□□ -0.87
CHD2-213ENST00000628118 ZMYM6O95789 1325 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 CCDC171Q6TFL3 1326 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 USP17L12C9JPN9 530 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 USP17L21D6R901 530 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 CA12O43570 354 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 PRKAB2O43741 272 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 CHGBP05060 677 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 APPP05067 770 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 SLC3A2P08195 630 aaKnown RBP9.6□□□□□ -0.87
CHD2-213ENST00000628118 ASNSP08243 561 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 CAP2P40123 477 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 TDO2P48775 406 aa9.6□□□□□ -0.87
CHD2-213ENST00000628118 GABPAQ06546 454 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms