RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 HIC1Q14526 733 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 AOC3Q16853 763 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 SDR42E1Q8WUS8 393 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 TMX3Q96JJ7 454 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
SOX2-OT-244ENST00000627738 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 CERS5Q8N5B7 392 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 PSMD1Q99460 953 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 MXD3Q9BW11 206 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 KCNQ5Q9NR82 932 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
SOX2-OT-244ENST00000627738 F8W031 263 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 BAG3O95817 575 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 FOSBP53539 338 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 PPP4CP60510 307 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 DHX32Q7L7V1 743 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 LIMCH1Q9UPQ0 1083 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 SUGT1Q9Y2Z0 365 aa11.76□□□□□ -0.53
SOX2-OT-244ENST00000627738 LAMA4Q16363 1823 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 BTDP43251 543 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 CTDSPL2Q05D32 466 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 PTGDRQ13258 359 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 CUL4AQ13619 759 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 STRIP1Q5VSL9 837 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 Q6ZUG5 572 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 MB21D2Q8IYB1 491 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 SH3RF3Q8TEJ3 882 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-244ENST00000627738 MYH2Q9UKX2 1941 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 LARGE1O95461 756 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 FKBP1AP62942 108 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 PPARAQ07869 468 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 TRDNQ13061 729 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 DACT2Q5SW24 774 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 GIMAP6Q6P9H5 292 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 CHST3Q7LGC8 479 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 ZSCAN31Q96LW9 406 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 GAKO14976 1311 aa11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-244ENST00000627738 YDJCA8MPS7 323 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 FECHP22830 423 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 DDIT3P35638 169 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP5P45974 858 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 NEDD4P46934 1319 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 FGD1P98174 961 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 ME3Q16798 604 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 STK11IPQ8N1F8 1099 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 VPS33BQ9H267 617 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 INCENPQ9NQS7 918 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 DAGLAQ9Y4D2 1042 aa11.73□□□□□ -0.53
SOX2-OT-244ENST00000627738 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 CYP2D7A0A087X1C5 515 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 B4E1Z4 1266 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP17L12C9JPN9 530 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 USP17L21D6R901 530 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms