RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 FRAT2O75474 233 aaPredicted RBP10.79□□□□□ -0.68
TCF4-258ENST00000627320 RGS3P49796 1198 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 HDLBPQ00341 1268 aaKnown RBP10.79□□□□□ -0.68
TCF4-258ENST00000627320 MAP3K21Q5TCX8 1036 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 PPM1EQ8WY54 764 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 NECAB3Q96P71 396 aaPredicted RBP10.79□□□□□ -0.68
TCF4-258ENST00000627320 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 AGTPBP1Q9UPW5 1226 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
TCF4-258ENST00000627320 FAM110CQ1W6H9 321 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 FKBP1CQ5VVH2 108 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 VPS37DQ86XT2 251 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 SENP6Q9GZR1 1112 aaPredicted RBP10.78□□□□□ -0.68
TCF4-258ENST00000627320 USP40Q9NVE5 1235 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 FLRT1Q9NZU1 646 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 MYBBP1AQ9BQG0 1328 aaKnown RBP10.78□□□□□ -0.68
TCF4-258ENST00000627320 CHD9Q3L8U1 2897 aa10.78□□□□□ -0.68
TCF4-258ENST00000627320 NCOR1O75376 2440 aa10.77□□□□□ -0.68
TCF4-258ENST00000627320 EPHB4P54760 987 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 HMGCS2P54868 508 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 PICALMQ13492 652 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 GRIN2CQ14957 1233 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 HHIPL2Q6UWX4 724 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 FASTKD5Q7L8L6 764 aaKnown RBP10.77□□□□□ -0.69
TCF4-258ENST00000627320 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 FOCADQ5VW36 1801 aa10.77□□□□□ -0.69
TCF4-258ENST00000627320 GRM8O00222 908 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 NBPF7P0C2Y1 421 aaPredicted RBP10.76□□□□□ -0.69
TCF4-258ENST00000627320 ITGB8P26012 769 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 JAG1P78504 1218 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 METTL24Q5JXM2 366 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 ANO1Q5XXA6 986 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 BADQ92934 168 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 ASCC2Q9H1I8 757 aaPredicted RBP10.76□□□□□ -0.69
TCF4-258ENST00000627320 PORCNQ9H237 461 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 PICK1Q9NRD5 415 aa10.76□□□□□ -0.69
TCF4-258ENST00000627320 RTP1P59025 263 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 MAP3K12Q12852 859 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 SPP2Q13103 211 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 Q3C1V9 767 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 TRPV1Q8NER1 839 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 TBC1D22AQ8WUA7 517 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 HOOK2Q96ED9 719 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
TCF4-258ENST00000627320 PRDM5Q9NQX1 630 aaPredicted RBP10.75□□□□□ -0.69
TCF4-258ENST00000627320 ATP11BQ9Y2G3 1177 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
TCF4-258ENST00000627320 ZNFX1Q9P2E3 1918 aaKnown RBP10.74□□□□□ -0.69
TCF4-258ENST00000627320 FGFR2P21802 821 aa10.74□□□□□ -0.69
TCF4-258ENST00000627320 RALBP1Q15311 655 aa10.74□□□□□ -0.69
TCF4-258ENST00000627320 TJAP1Q5JTD0 557 aa10.74□□□□□ -0.69
TCF4-258ENST00000627320 ZSCAN29Q8IWY8 852 aaPredicted RBP10.74□□□□□ -0.69
TCF4-258ENST00000627320 LBHD1Q9BQE6 289 aaPredicted RBP10.74□□□□□ -0.69
TCF4-258ENST00000627320 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
TCF4-258ENST00000627320 XIRP2A4UGR9 3374 aa10.74□□□□□ -0.69
TCF4-258ENST00000627320 CHD7Q9P2D1 2997 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 TRIM43BA6NCK2 446 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 PDE8BO95263 885 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 ZKSCAN1P17029 563 aaPredicted RBP10.73□□□□□ -0.69
TCF4-258ENST00000627320 TRIM60Q495X7 471 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 CCDC184Q52MB2 194 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 CAVIN4Q5BKX8 364 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 GJC2Q5T442 439 aaPredicted RBP10.73□□□□□ -0.69
TCF4-258ENST00000627320 SLC4A10Q6U841 1118 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 ZNF384Q8TF68 577 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 TRIM43Q96BQ3 446 aaPredicted RBP10.73□□□□□ -0.69
TCF4-258ENST00000627320 P2RX7Q99572 595 aaKnown RBP10.73□□□□□ -0.69
TCF4-258ENST00000627320 MAST3O60307 1309 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 MROH5Q6ZUA9 1318 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
TCF4-258ENST00000627320 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 USP6NLQ92738 828 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 PAGR1Q9BTK6 254 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 MRIQ9BWK5 157 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 PDLIM7Q9NR12 457 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 MORF4L1Q9UBU8 362 aa10.72□□□□□ -0.69
TCF4-258ENST00000627320 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
TCF4-258ENST00000627320 LRRC37A2A6NM11 1700 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 GRXCR1A8MXD5 290 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 VAMP4O75379 141 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 MYH1P12882 1939 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 ADORA1P30542 326 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 PHKA1P46020 1223 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 MTMR2Q13614 643 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 CCDC85BQ15834 202 aaPredicted RBP10.71□□□□□ -0.69
TCF4-258ENST00000627320 PARP14Q460N5 1801 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 FERMT2Q96AC1 680 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.69
TCF4-258ENST00000627320 RBPJLQ9UBG7 517 aa10.71□□□□□ -0.69
TCF4-258ENST00000627320 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 CTNND1O60716 968 aaKnown RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 CNGA1P29973 690 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 CYP2C19P33261 490 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 PBX2P40425 430 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 BTDP43251 543 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms