RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 DCP1AQ9NPI6 582 aaPredicted RBP6.38□□□□□ -1.39
VBP1-204ENST00000625964 CCDC87Q9NVE4 849 aa6.38□□□□□ -1.39
VBP1-204ENST00000625964 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 PPP2R3AQ06190 1150 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 PDE4CQ08493 712 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 CSRNP1Q96S65 589 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 SMG5Q9UPR3 1016 aaKnown RBP6.37□□□□□ -1.39
VBP1-204ENST00000625964 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
VBP1-204ENST00000625964 SRFP11831 508 aa6.36□□□□□ -1.39
VBP1-204ENST00000625964 PHLDB3Q6NSJ2 640 aa6.36□□□□□ -1.39
VBP1-204ENST00000625964 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
VBP1-204ENST00000625964 MAPK8IP1Q9UQF2 711 aa6.36□□□□□ -1.39
VBP1-204ENST00000625964 FAAP100Q0VG06 881 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 KCNB2Q92953 911 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 ETV2O00321 342 aaPredicted RBP6.35□□□□□ -1.39
VBP1-204ENST00000625964 NUAK1O60285 661 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
VBP1-204ENST00000625964 ZNF157P51786 506 aaPredicted RBP6.35□□□□□ -1.39
VBP1-204ENST00000625964 USPL1Q5W0Q7 1092 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 NPHS2Q9NP85 383 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 PARD6AQ9NPB6 346 aa6.35□□□□□ -1.39
VBP1-204ENST00000625964 RAC2P15153 192 aa6.34□□□□□ -1.39
VBP1-204ENST00000625964 LINC00310P59036 64 aa6.34□□□□□ -1.39
VBP1-204ENST00000625964 KCNN1Q92952 543 aa6.34□□□□□ -1.39
VBP1-204ENST00000625964 PRDM5Q9NQX1 630 aaPredicted RBP6.34□□□□□ -1.39
VBP1-204ENST00000625964 SEMA3GQ9NS98 782 aa6.34□□□□□ -1.39
VBP1-204ENST00000625964 TMEM39AQ9NV64 488 aa6.34□□□□□ -1.39
VBP1-204ENST00000625964 ABL1P00519 1130 aa6.33□□□□□ -1.4
VBP1-204ENST00000625964 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
VBP1-204ENST00000625964 ABHD4Q8TB40 342 aa6.33□□□□□ -1.4
VBP1-204ENST00000625964 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
VBP1-204ENST00000625964 EOMESO95936 686 aa6.32□□□□□ -1.4
VBP1-204ENST00000625964 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
VBP1-204ENST00000625964 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
VBP1-204ENST00000625964 ARNTP27540 789 aa6.31□□□□□ -1.4
VBP1-204ENST00000625964 ZNF211Q13398 564 aaPredicted RBP6.31□□□□□ -1.4
VBP1-204ENST00000625964 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
VBP1-204ENST00000625964 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
VBP1-204ENST00000625964 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
VBP1-204ENST00000625964 ANO2Q9NQ90 1003 aa6.31□□□□□ -1.4
VBP1-204ENST00000625964 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
VBP1-204ENST00000625964 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
VBP1-204ENST00000625964 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
VBP1-204ENST00000625964 GADD45BO75293 160 aaPredicted RBP6.3□□□□□ -1.4
VBP1-204ENST00000625964 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 THAP5Q7Z6K1 395 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 PPP4R2Q9NY27 417 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 BRPF3Q9ULD4 1205 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 FANCGO15287 622 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
VBP1-204ENST00000625964 SYN1P17600 705 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 DTHD1Q6ZMT9 781 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 SULF2Q8IWU5 870 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 ZCCHC4Q9H5U6 513 aa6.3□□□□□ -1.4
VBP1-204ENST00000625964 SERPINB4P48594 390 aa6.29□□□□□ -1.4
VBP1-204ENST00000625964 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
VBP1-204ENST00000625964 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
VBP1-204ENST00000625964 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
VBP1-204ENST00000625964 NME2P22392 152 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 NTF4P34130 210 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 PPM1JQ5JR12 505 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 SFRP5Q5T4F7 317 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 MFSD4AQ8N468 514 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 GPBAR1Q8TDU6 330 aa6.28□□□□□ -1.4
VBP1-204ENST00000625964 H3BRB1 525 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 LRIG2O94898 1065 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 BRD1O95696 1058 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 RING1Q06587 406 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 ZNF252P-AS1Q0IIN9 211 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 ORC1Q13415 861 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 GRM2Q14416 872 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 MAP1SQ66K74 1059 aaPredicted RBP6.27□□□□□ -1.41
VBP1-204ENST00000625964 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 TUT1Q9H6E5 874 aaKnown RBP6.27□□□□□ -1.41
VBP1-204ENST00000625964 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 EGFL7Q9UHF1 273 aa6.27□□□□□ -1.41
VBP1-204ENST00000625964 CDKAL1Q5VV42 579 aa6.26□□□□□ -1.41
VBP1-204ENST00000625964 GLYCTKQ8IVS8 523 aa6.26□□□□□ -1.41
VBP1-204ENST00000625964 BAHD1Q8TBE0 780 aaPredicted RBP6.26□□□□□ -1.41
VBP1-204ENST00000625964 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
VBP1-204ENST00000625964 ST14Q9Y5Y6 855 aa6.26□□□□□ -1.41
VBP1-204ENST00000625964 A0A0G2JLL6 359 aaPredicted RBP6.25□□□□□ -1.41
VBP1-204ENST00000625964 H3BS24 57 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 BMP7P18075 431 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 NFIXQ14938 502 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 ARMCX6Q7L4S7 300 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 TXNDC2Q86VQ3 553 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 STK35Q8TDR2 534 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 BORCS6Q96GS4 357 aa6.25□□□□□ -1.41
VBP1-204ENST00000625964 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms