RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CALUO43852 315 aaPredicted RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 TNNT1P13805 278 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 AATFQ9NY61 560 aaKnown RBP eCLIP12.43□□□□□ -0.421e-10■■■■■ 27.8
VPS8-227ENST00000625842 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 N4BP3O15049 544 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 PHKG2P15735 406 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 KCNJ6P48051 423 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 CTSWP56202 376 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 CRACR2AQ9BSW2 395 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 DDX23Q9BUQ8 820 aaKnown RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 NONOQ15233 471 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS8-227ENST00000625842 MIER3Q7Z3K6 550 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 SPATA5Q8NB90 893 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 ANGEL1Q9UNK9 670 aaKnown RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 SYKP43405 635 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 TFCP2Q12800 502 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 SPECC1Q5M775 1068 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
VPS8-227ENST00000625842 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 MAP3K7O43318 606 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 TNNC2P02585 160 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS8-227ENST00000625842 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
VPS8-227ENST00000625842 CSRNP1Q96S65 589 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
VPS8-227ENST00000625842 GAS7O60861 476 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
VPS8-227ENST00000625842 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 ZFYVE28Q9HCC9 887 aa12.42□□□□□ -0.42
VPS8-227ENST00000625842 KBTBD13C9JR72 458 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 DEXIO95424 95 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 ATP6V0A1Q93050 837 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 CHMP2AO43633 222 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 LEKR1Q6ZMV7 388 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 XAGE2Q96GT9 111 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 HESX1Q9UBX0 185 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 SLC12A6Q9UHW9 1150 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 NEMFO60524 1076 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
VPS8-227ENST00000625842 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
VPS8-227ENST00000625842 CCPG1Q9ULG6 757 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 LETM2Q2VYF4 491 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
VPS8-227ENST00000625842 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
VPS8-227ENST00000625842 FAM160B2Q86V87 743 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 MED10Q9BTT4 135 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 HOXC10Q9NYD6 342 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ATP7AQ04656 1500 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 GSDMDP57764 484 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
VPS8-227ENST00000625842 FOXP4Q8IVH2 680 aaPredicted RBP12.4□□□□□ -0.42
VPS8-227ENST00000625842 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 ASNSP08243 561 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 TRIM27P14373 513 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 GOLGA5Q8TBA6 731 aa12.4□□□□□ -0.42
VPS8-227ENST00000625842 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
VPS8-227ENST00000625842 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 KRT19P08727 400 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 ACTN1P12814 892 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 GSE1Q14687 1217 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 TAF3Q5VWG9 929 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 DHX32Q7L7V1 743 aaKnown RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 NR2E3Q9Y5X4 410 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 NUP153P49790 1475 aaKnown RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 GMNNO75496 209 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 R3HDM1Q15032 1099 aaKnown RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 INF2Q27J81 1249 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms