RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 BICDL2A1A5D9 508 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 ENPP1P22413 925 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 CABP4P57796 275 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 ARHGAP27Q6ZUM4 889 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 OTUD7AQ8TE49 926 aaPredicted RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 CAPS2Q9BXY5 557 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 NFAT5O94916 1531 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 CHUKO15111 745 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 CAVIN2O95810 425 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 CWF19L2Q2TBE0 894 aaKnown RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 SEPT14Q6ZU15 432 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 ZNF496Q96IT1 587 aaPredicted RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 RUFY1Q96T51 708 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 PARD6BQ9BYG5 372 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 DNAAF2Q9NVR5 837 aaKnown RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 AHDC1Q5TGY3 1603 aaPredicted RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 DLG5Q8TDM6 1919 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 PPFIA3O75145 1194 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 TRIM21P19474 475 aaKnown RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 HOXD10P28358 340 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 ELF2Q15723 593 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 CCDC92Q53HC0 331 aaPredicted RBP10.44□□□□□ -0.74
USB1-216ENST00000624720 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 SEL1LQ9UBV2 794 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.44□□□□□ -0.74
USB1-216ENST00000624720 USP16Q9Y5T5 823 aa10.44□□□□□ -0.74
USB1-216ENST00000624720 MED1Q15648 1581 aaPredicted RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 FRMD3A2A2Y4 597 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 PHKG2P15735 406 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 CLCN2P51788 898 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 KCNB1Q14721 858 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 NAA25Q14CX7 972 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 THEMIS2Q5TEJ8 643 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 UBE2Q1Q7Z7E8 422 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 TTC5Q8N0Z6 440 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 MPP4Q96JB8 637 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 M0R2C6 588 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 TRIM37O94972 964 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 PARNO95453 639 aaKnown RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 VIL1P09327 827 aaKnown RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 ATICP31939 592 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 Q4G0T1 1027 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 MFN1Q8IWA4 741 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 PEX5LQ8IYB4 626 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 CEP57L1Q8IYX8 460 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
USB1-216ENST00000624720 GABPB2Q8TAK5 448 aaPredicted RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 ZKSCAN4Q969J2 545 aaPredicted RBP10.43□□□□□ -0.74
USB1-216ENST00000624720 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
USB1-216ENST00000624720 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 MEGF6O75095 1541 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 OAS2P29728 719 aaKnown RBP10.42□□□□□ -0.74
USB1-216ENST00000624720 PDE6BP35913 854 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.42□□□□□ -0.74
USB1-216ENST00000624720 SMUG1Q53HV7 270 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 FBXW10Q5XX13 1052 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 MTHFD1LQ6UB35 978 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 ZCCHC17Q9NP64 241 aaKnown RBP10.42□□□□□ -0.74
USB1-216ENST00000624720 ADAM21Q9UKJ8 722 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 GOLGA6L10A6NI86 522 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
USB1-216ENST00000624720 RPL13P26373 211 aaKnown RBP10.42□□□□□ -0.74
USB1-216ENST00000624720 FOXR1Q6PIV2 292 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 IFNL2Q8IZJ0 200 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 PDILTQ8N807 584 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 DDX12PQ92771 950 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 CLIP3Q96DZ5 547 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 BRD8Q9H0E9 1235 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 HOXC10Q9NYD6 342 aa10.42□□□□□ -0.74
USB1-216ENST00000624720 ZNF215Q9UL58 517 aaPredicted RBP10.42□□□□□ -0.74
USB1-216ENST00000624720 LTN1O94822 1766 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 CC2D1AQ6P1N0 951 aaPredicted RBP10.41□□□□□ -0.74
USB1-216ENST00000624720 FILIP1Q7Z7B0 1213 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 CABS1Q96KC9 395 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 CORO1BQ9BR76 489 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
USB1-216ENST00000624720 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
USB1-216ENST00000624720 ATP5J2-PTCD1G3V325 749 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 ATP8B1O43520 1251 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 CEP104O60308 925 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 PDE4BQ07343 736 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 RCN1Q15293 331 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 SLC30A9Q6PML9 568 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 OR8K1Q8NGG5 319 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 SLC35B4Q969S0 331 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 VMP1Q96GC9 406 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 RBM41Q96IZ5 413 aaKnown RBP10.41□□□□□ -0.74
USB1-216ENST00000624720 IL1RAPL2Q9NP60 686 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.41□□□□□ -0.74
USB1-216ENST00000624720 PYCARDQ9ULZ3 195 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms