RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CSF1RP07333 972 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 OAS2P29728 719 aaKnown RBP9.94□□□□□ -0.82
VCL-207ENST00000624354 NTRK3Q16288 839 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 HSP90AA4PQ58FG1 418 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 SRLQ86TD4 932 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 TMEM139Q8IV31 216 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 NOSTRINQ8IVI9 506 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 GOLGA5Q8TBA6 731 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 IGDCC4Q8TDY8 1250 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 C8orf37Q96NL8 207 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 SLC26A6Q9BXS9 759 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 SLC12A7Q9Y666 1083 aa9.94□□□□□ -0.82
VCL-207ENST00000624354 GLI3P10071 1580 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 RANBP6O60518 1105 aaKnown RBP9.93□□□□□ -0.82
VCL-207ENST00000624354 PDE4BQ07343 736 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 POSTNQ15063 836 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 SPECC1LQ69YQ0 1117 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 KIF6Q6ZMV9 814 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 ZBTB38Q8NAP3 1195 aaPredicted RBP9.93□□□□□ -0.82
VCL-207ENST00000624354 MLKLQ8NB16 471 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 INTS13Q9NVM9 706 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 RRP15Q9Y3B9 282 aaKnown RBP9.93□□□□□ -0.82
VCL-207ENST00000624354 NFE2L3Q9Y4A8 694 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 UBN2Q6ZU65 1347 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 FANCGO15287 622 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 BMP6P22004 513 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 TBX2Q13207 712 aaPredicted RBP9.93□□□□□ -0.82
VCL-207ENST00000624354 SPECC1Q5M775 1068 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 AIDAQ96BJ3 306 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 MYL10Q9BUA6 226 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 CNNM1Q9NRU3 951 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 ZNF532Q9HCE3 1301 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 STK36Q9NRP7 1315 aa9.93□□□□□ -0.82
VCL-207ENST00000624354 ALS2Q96Q42 1657 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 IFIT3O14879 490 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 FOXN1O15353 648 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 LIFRP42702 1097 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 ENOX1Q8TC92 643 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 ZNF512BQ96KM6 892 aaPredicted RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 NCAPGQ9BPX3 1015 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 ZCCHC17Q9NP64 241 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 MAN1B1Q9UKM7 699 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 TJP1Q07157 1748 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 GUCY2CP25092 1073 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 MDM2Q00987 491 aaPredicted RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 PIH1D3Q9NQM4 214 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 MAP3K15Q6ZN16 1313 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 BTBD18B2RXH4 712 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 POLR2DO15514 142 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 PDE6AP16499 860 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 ITGA6P23229 1130 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 ADKP55263 362 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 RILPL1Q5EBL4 403 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
VCL-207ENST00000624354 TRIM22Q8IYM9 498 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 STK11IPQ8N1F8 1099 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 TC2NQ8N9U0 490 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 TOMM22Q9NS69 142 aa9.92□□□□□ -0.82
VCL-207ENST00000624354 PKD1L3Q7Z443 1732 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 ANKRD18BA2A2Z9 1011 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 CLGNO14967 610 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 SEC31AO94979 1220 aaKnown RBP9.91□□□□□ -0.82
VCL-207ENST00000624354 MMP1P03956 469 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 ZNF18P17022 549 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 IFNAR1P17181 557 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 PTPREP23469 700 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 SMC1AQ14683 1233 aaKnown RBP9.91□□□□□ -0.82
VCL-207ENST00000624354 TTC31Q49AM3 519 aaPredicted RBP9.91□□□□□ -0.82
VCL-207ENST00000624354 KANK3Q6NY19 840 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 WDR24Q96S15 920 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 NAPBQ9H115 298 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 JRKLQ9Y4A0 524 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 ATRNO75882 1429 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 LMAN1P49257 510 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 PSEN1P49768 467 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 NT5DC1Q5TFE4 455 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 STRBPQ96SI9 672 aaKnown RBP9.91□□□□□ -0.82
VCL-207ENST00000624354 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 MRFAP1Q9Y605 127 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 NUP188Q5SRE5 1749 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 RIC1Q4ADV7 1423 aa9.91□□□□□ -0.82
VCL-207ENST00000624354 UBE2Q2LH0YL09 131 aa9.9□□□□□ -0.82
VCL-207ENST00000624354 UQCRFS1P1P0C7P4 283 aa9.9□□□□□ -0.82
VCL-207ENST00000624354 KCNQ4P56696 695 aa9.9□□□□□ -0.82
VCL-207ENST00000624354 FMR1Q06787 632 aaKnown RBP eCLIP9.9□□□□□ -0.825e-8■■■□□ 18.8
VCL-207ENST00000624354 ALX1Q15699 326 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms