RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 SLF2Q8IX21 1173 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ERMNQ8TAM6 284 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 MYOM2P54296 1465 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ACTN2P35609 894 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 RPGRQ92834 1020 aaKnown RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 USP28Q96RU2 1077 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 SAMD15Q9P1V8 674 aa6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF219Q9P2Y4 722 aaPredicted RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
ERCC6-213ENST00000624341 AOX1Q06278 1338 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PNOCQ13519 176 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 RAPGEF1Q13905 1077 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 KRT40Q6A162 431 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PPP4R3AQ6IN85 833 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 B4GALNT4Q76KP1 1039 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CADPS2Q86UW7 1296 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 JAKMIP2Q96AA8 810 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 C6orf50Q9HD87 102 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 MCM9Q9NXL9 1143 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 GOLGA6BA6NDN3 693 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 TRAF5O00463 557 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CUTAO60888 179 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 ADAMTS2O95450 1211 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 STAMBPO95630 424 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 VIMP08670 466 aaKnown RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CALM1P0DP23 149 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CALM2P0DP24 149 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CALM3P0DP25 149 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PLCB3Q01970 1234 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SND1Q7KZF4 910 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 LRRC8AQ8IWT6 810 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF594Q96JF6 807 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 IQCGQ9H095 443 aaKnown RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PLEKHA4Q9H4M7 779 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 KIAA1468Q9P260 1216 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 TPCN1Q9ULQ1 816 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SETBP1Q9Y6X0 1596 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 AHDC1Q5TGY3 1603 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 ETF1P62495 437 aaKnown RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 LETM2Q2VYF4 491 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 TMTC1Q8IUR5 882 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SUCLG2Q96I99 432 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 TM6SF1Q9BZW5 370 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 STMN4Q9H169 189 aaPredicted RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 SHPRHQ149N8 1683 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PRPHP41219 470 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PDE4DQ08499 809 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 GSTA5Q7RTV2 222 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 CSGALNACT2Q8N6G5 542 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 KBTBD3Q8NAB2 608 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 ZCRB1Q8TBF4 217 aaKnown RBP6.32□□□□□ -1.4
ERCC6-213ENST00000624341 PPM1EQ8WY54 764 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 TRIM31Q9BZY9 425 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 KCNJ14Q9UNX9 436 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 JAG2Q9Y219 1238 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 RTL9Q8NET4 1388 aa6.32□□□□□ -1.4
ERCC6-213ENST00000624341 EYA2O00167 538 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 GPAA1O43292 621 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PRDM1O75626 825 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 GNAT2P19087 354 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 POSTNQ15063 836 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PIK3AP1Q6ZUJ8 805 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC97Q96F63 343 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 RNMTO43148 476 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 DEXIO95424 95 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 DCAF17Q5H9S7 520 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 BEND3Q5T5X7 828 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 GPR161Q8N6U8 529 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TTC14Q96N46 770 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TSGA10Q9BZW7 698 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 SETD1AO15047 1707 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ABCC4O15439 1325 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 hCG_1642624A0A1W2PR95 340 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC160A6NGH7 325 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 F8W031 263 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 IRS4O14654 1257 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 EEF2P13639 858 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PAK1Q13153 545 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 MYSM1Q5VVJ2 828 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 RASEFQ8IZ41 740 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 BICD1Q96G01 975 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 RSRC1Q96IZ7 334 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 MTRF1LQ9UGC7 380 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 HLA-DOAP06340 250 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 HOXC9P31274 260 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ADALQ6DHV7 355 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TRMT2AQ8IZ69 625 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 SECISBP2LQ93073 1101 aaKnown RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 FERMT2Q96AC1 680 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TMEM87BQ96K49 555 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms