RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 NDC80O14777 642 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 PHACTR2O75167 634 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 SLU7O95391 586 aaKnown RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 CCDC42Q96M95 316 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 NT5C3AQ9H0P0 336 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 LUC7L2Q9Y383 392 aaKnown RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 NEXMIFQ5QGS0 1516 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 CTR9Q6PD62 1173 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 DIS3L2Q8IYB7 885 aaKnown RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 ATP8A2Q9NTI2 1148 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 ZBED4O75132 1171 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 ACTN2P35609 894 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 SMTNP53814 917 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 MAP2K1Q02750 393 aaPredicted RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 KIFAP3Q92845 792 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 AS3MTQ9HBK9 375 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 TRPC5Q9UL62 973 aaPredicted RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 ARHGEF40Q8TER5 1519 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 PLEKHG2Q9H7P9 1386 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 CCT6AP40227 531 aaKnown RBP9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
AP000542.3-201ENST00000623391 POLR3GO15318 223 aaPredicted RBP9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 KRT40Q6A162 431 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 CYP26C1Q6V0L0 522 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 TNFAIP1Q13829 316 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 POLA2Q14181 598 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 ISM2Q6H9L7 571 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 CTNNBL1Q8WYA6 563 aaPredicted RBP9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 NAP1L3Q99457 506 aaPredicted RBP9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 SAP30BPQ9UHR5 308 aaKnown RBP9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 PTPRUQ92729 1446 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 VWA3AA6NCI4 1184 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 PAK1Q13153 545 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 ZNF174Q15697 407 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 LRRIQ1Q96JM4 1722 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 LAD1O00515 517 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 IFNL3Q8IZI9 196 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 TEKT1Q969V4 418 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 AATFQ9NY61 560 aaKnown RBP eCLIP9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 XDHP47989 1333 aa9.97□□□□□ -0.81
AP000542.3-201ENST00000623391 ADALQ6DHV7 355 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 LSG1Q9H089 658 aaKnown RBP9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 INCENPQ9NQS7 918 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 IFNKQ9P0W0 207 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 CEP83Q9Y592 693 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 ABCC12Q96J65 1359 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 SNX16P57768 344 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 LETM2Q2VYF4 491 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 NIM1KQ8IY84 436 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 CCDC77Q9BR77 488 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 SPATA31A3Q5VYP0 1347 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 IGSF3O75054 1194 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 KLHDC4Q8TBB5 520 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 SREK1Q8WXA9 508 aaKnown RBP9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 MMRN2Q9H8L6 949 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 CALCOCO1Q9P1Z2 691 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 CTNND2Q9UQB3 1225 aa9.96□□□□□ -0.81
AP000542.3-201ENST00000623391 PDE6AP16499 860 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 LIG1P18858 919 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 HLTFQ14527 1009 aaKnown RBP eCLIP9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 MAP4K1Q92918 833 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 CNKSR1Q969H4 720 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 CTDSPL2Q05D32 466 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 CHURC1Q8WUH1 139 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 PXDNLA1KZ92 1463 aa9.96□□□□□ -0.82
AP000542.3-201ENST00000623391 LOC102724428A0A0B4J2F2 783 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 PDE8BO95263 885 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 BAG6P46379 1132 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 SIK1P57059 783 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 TNNC1P63316 161 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 EAF2Q96CJ1 260 aaPredicted RBP9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 NSRP1Q9H0G5 558 aaKnown RBP9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 PDE4DQ08499 809 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 SLFN12Q8IYM2 578 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 ZNF654Q8IZM8 581 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 KCNQ3O43525 872 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 HSPD1P10809 573 aaKnown RBP9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 CRKLP46109 303 aaKnown RBP9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 TRAPPC10P48553 1259 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 POSTNQ15063 836 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 SPECC1LQ69YQ0 1117 aa9.95□□□□□ -0.82
AP000542.3-201ENST00000623391 DRC1Q96MC2 740 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms