RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-208ENST00000622836 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 ALDH1A1P00352 501 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 MAP3K10Q02779 954 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 PPIL2Q13356 520 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 CCL15Q16663 113 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
PCDHGC3-208ENST00000622836 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 IRF6O14896 467 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 TBC1D8O95759 1140 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 CETPP11597 493 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 SNAPC2Q13487 334 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 MYH7P12883 1935 aa16.84■□□□□ 0.29
PCDHGC3-208ENST00000622836 CHGBP05060 677 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 ZFYP08048 801 aaPredicted RBP16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 PDE1AP54750 535 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 MS4A4AQ96JQ5 239 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 ZHX2Q9Y6X8 837 aa16.83■□□□□ 0.28
PCDHGC3-208ENST00000622836 SALL3Q9BXA9 1300 aa16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 IGF2BP3O00425 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 RNF113AO15541 343 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 NUCB1Q02818 461 aa16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 BRI3BPQ8WY22 251 aa16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 MYH1P12882 1939 aa16.82■□□□□ 0.28
PCDHGC3-208ENST00000622836 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 PTPRAP18433 802 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 TNS4Q8IZW8 715 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 APPBP2Q92624 585 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 STAP2Q9UGK3 403 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 SLC4A4Q9Y6R1 1079 aa16.81■□□□□ 0.28
PCDHGC3-208ENST00000622836 PRKAB2O43741 272 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 CAP2P40123 477 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 PTPN18Q99952 460 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
PCDHGC3-208ENST00000622836 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 GDF11O95390 407 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 TAF1CQ15572 869 aaPredicted RBP16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 CCDC84Q86UT8 332 aaPredicted RBP16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 EHD4Q9H223 541 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 KCNH4Q9UQ05 1017 aa16.79■□□□□ 0.28
PCDHGC3-208ENST00000622836 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 CXCL11O14625 94 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 ASNSP08243 561 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 PLCD1P51178 756 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 FAM43AQ8N2R8 423 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 LAMB1P07942 1786 aa16.78■□□□□ 0.28
PCDHGC3-208ENST00000622836 SIPA1L1O43166 1804 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 BTBD19C9JJ37 291 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 GPR25O00155 361 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 APPP05067 770 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 CRHR2Q13324 411 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 STRBPQ96SI9 672 aaKnown RBP16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 AFG3L2Q9Y4W6 797 aa16.77■□□□□ 0.28
PCDHGC3-208ENST00000622836 M0R2C6 588 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 GPAA1O43292 621 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 CYP2D6P10635 497 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 GNAT2P19087 354 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 SPP2Q13103 211 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 ZNF296Q8WUU4 475 aaPredicted RBP16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 R3HDMLQ9H3Y0 253 aa16.76■□□□□ 0.27
PCDHGC3-208ENST00000622836 ATAD5Q96QE3 1844 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 A0A0G2JLL6 359 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 USP17L21D6R901 530 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms