RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
FAM3A-222ENST00000621967 PI16Q6UXB8 463 aa20.29■□□□□ 0.84
FAM3A-222ENST00000621967 PUS7LQ9H0K6 701 aaKnown RBP20.29■□□□□ 0.84
FAM3A-222ENST00000621967 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-222ENST00000621967 PODNQ7Z5L7 613 aa20.29■□□□□ 0.84
FAM3A-222ENST00000621967 NIM1KQ8IY84 436 aa20.29■□□□□ 0.84
FAM3A-222ENST00000621967 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
FAM3A-222ENST00000621967 PRC1O43663 620 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 GRIN3BO60391 1043 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 HAND2P61296 217 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 FAM160A1Q05DH4 1040 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 IQCB1Q15051 598 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
FAM3A-222ENST00000621967 NAP1L2Q9ULW6 460 aaPredicted RBP20.28■□□□□ 0.84
FAM3A-222ENST00000621967 HPS5Q9UPZ3 1129 aa20.28■□□□□ 0.84
FAM3A-222ENST00000621967 COL1A1P02452 1464 aaPredicted RBP20.28■□□□□ 0.84
FAM3A-222ENST00000621967 GPAA1O43292 621 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.84
FAM3A-222ENST00000621967 ANTXR2P58335 489 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 CCDC73Q6ZRK6 1079 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 RTEL1Q9NZ71 1219 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 PTGS1P23219 599 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 CDC25BP30305 580 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 STX1AQ16623 288 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 SARM1Q6SZW1 724 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 RGS22Q8NE09 1264 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
FAM3A-222ENST00000621967 PDS5AQ29RF7 1337 aaKnown RBP20.26■□□□□ 0.83
FAM3A-222ENST00000621967 DHX16O60231 1041 aaKnown RBP20.26■□□□□ 0.83
FAM3A-222ENST00000621967 LMNB1P20700 586 aa20.26■□□□□ 0.83
FAM3A-222ENST00000621967 ADD2P35612 726 aa20.26■□□□□ 0.83
FAM3A-222ENST00000621967 RBM10P98175 930 aaKnown RBP20.26■□□□□ 0.83
FAM3A-222ENST00000621967 GUCY1B3Q02153 619 aa20.26■□□□□ 0.83
FAM3A-222ENST00000621967 TRIM5Q9C035 493 aa20.26■□□□□ 0.83
FAM3A-222ENST00000621967 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.836e-7■■■■□ 22.7
FAM3A-222ENST00000621967 ZSCAN25Q6NSZ9 544 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 COL4A5P29400 1685 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 KLF18A0A0U1RQI7 1052 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 ZBTB22O15209 634 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 GTF2IP78347 998 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 TTF1Q15361 905 aaPredicted RBP20.25■□□□□ 0.83
FAM3A-222ENST00000621967 C11orf57Q6ZUT1 292 aaPredicted RBP20.25■□□□□ 0.83
FAM3A-222ENST00000621967 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
FAM3A-222ENST00000621967 A0A1W2PQ27 194 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 A0A1W2PQ64 194 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 A0A1W2PQD8 194 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 ZNF213O14771 459 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 KINO60870 393 aaKnown RBP20.24■□□□□ 0.83
FAM3A-222ENST00000621967 CCDC186Q7Z3E2 898 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 FBXO18Q8NFZ0 1043 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 NBPF3Q9H094 633 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 FAM13BQ9NYF5 915 aa20.24■□□□□ 0.83
FAM3A-222ENST00000621967 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 PPFIA3O75145 1194 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 ME1P48163 572 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 PRELPP51888 382 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 ADALQ6DHV7 355 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 MTERF4Q7Z6M4 381 aaKnown RBP20.23■□□□□ 0.83
FAM3A-222ENST00000621967 RALYLQ86SE5 291 aaKnown RBP20.23■□□□□ 0.83
FAM3A-222ENST00000621967 FMR1NBQ8N0W7 255 aaPredicted RBP20.23■□□□□ 0.83
FAM3A-222ENST00000621967 C8orf76Q96K31 380 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 ABCF2Q9UG63 623 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 PCDHA7Q9UN72 937 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 DCAF8L1A6NGE4 600 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 YEATS4O95619 227 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 UBE3CQ15386 1083 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 LINC00301Q8NCQ3 95 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 MRPS27Q92552 414 aaKnown RBP20.23■□□□□ 0.83
FAM3A-222ENST00000621967 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
FAM3A-222ENST00000621967 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 FAM205AQ6ZU69 1335 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 YDJCA8MPS7 323 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 TBC1D22AQ8WUA7 517 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 ORC3Q9UBD5 711 aaPredicted RBP20.22■□□□□ 0.83
FAM3A-222ENST00000621967 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 SBF1O95248 1867 aa20.22■□□□□ 0.83
FAM3A-222ENST00000621967 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 MFSD14BQ5SR56 506 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 STRIP1Q5VSL9 837 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 KCNQ5Q9NR82 932 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 ANO10Q9NW15 660 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 RNF181Q9P0P0 153 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 NRBP1Q9UHY1 535 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
FAM3A-222ENST00000621967 GLIPR1L2Q4G1C9 344 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 MRFAP1L1Q96HT8 127 aa20.21■□□□□ 0.83
FAM3A-222ENST00000621967 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
FAM3A-222ENST00000621967 DICER1Q9UPY3 1922 aaKnown RBP20.2■□□□□ 0.82
FAM3A-222ENST00000621967 GOLGA6L19H0YKK7 550 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms